Pairwise Alignments

Query, 316 a.a., hypothetical protein from Agrobacterium fabrum C58

Subject, 172 a.a., spore coat protein U from Klebsiella michiganensis M5al

 Score = 81.6 bits (200), Expect = 1e-20
 Identities = 57/165 (34%), Positives = 85/165 (51%), Gaps = 16/165 (9%)

Query: 168 TLLAPSCSSVTQNPTQVPFTVSAAVAPTCIISA----QNINFG--SHGVLNT-------- 213
           TL+    S       Q  F VSA +A  C + A    Q  +FG  S G L++        
Sbjct: 8   TLILLFTSGTHAAVVQKTFKVSAQIAAGCALGAGDGSQTTDFGTLSFGTLSSLYSNVDVA 67

Query: 214 AVDANGAINLTCTNGLNYSVALNGGLSNSPPAARQMVQGAASII-YGLYRDVSRTNVWGS 272
           +    G+I +TCT G   S+AL+ G++    + R M  G  + + Y LY+D +R NVWG+
Sbjct: 68  STSGAGSIIVTCTPGTAISIALDYGVNGGSASQRYMSNGNNNTLAYQLYQDANRANVWGN 127

Query: 273 AAGQIATGTGNGSLQTLTVFGRVPAQN-TPAPGNYADTVVVTVNY 316
           +   ++  +   + QT TV+GR+ A N  PA G+Y DTV VT+ Y
Sbjct: 128 STQALSVASFPSTTQTYTVYGRLFATNGFPAVGSYTDTVTVTLTY 172



 Score = 45.4 bits (106), Expect = 9e-10
 Identities = 47/158 (29%), Positives = 65/158 (41%), Gaps = 28/158 (17%)

Query: 8   ALAIAAAFVASPVLAQSCTFSMSD---------MNFGFVN-LAGGAAVDTTA---TLSVT 54
           A  +   F  S  +A  C     D         ++FG ++ L     V +T+   ++ VT
Sbjct: 19  AAVVQKTFKVSAQIAAGCALGAGDGSQTTDFGTLSFGTLSSLYSNVDVASTSGAGSIIVT 78

Query: 55  CNNPLSLALSIRICPNINAGGGGQSGGIRRMLQGSN-ILNYQLYQTSARTTAWGSVTQPA 113
           C      A+SI +   +N G   Q    R M  G+N  L YQLYQ + R   WG+ TQ  
Sbjct: 79  CTP--GTAISIALDYGVNGGSASQ----RYMSNGNNNTLAYQLYQDANRANVWGNSTQAL 132

Query: 114 LGAPPPIDMALPLLINSTTRTVYGRINAGQASAARGLY 151
             A  P          + T TVYGR+ A     A G Y
Sbjct: 133 SVASFP--------STTQTYTVYGRLFATNGFPAVGSY 162