Pairwise Alignments
Query, 533 a.a., ABC transporter permease from Agrobacterium fabrum C58
Subject, 530 a.a., ABC-F family ATPase from Vibrio cholerae E7946 ATCC 55056
Score = 164 bits (415), Expect = 8e-45
Identities = 155/530 (29%), Positives = 249/530 (46%), Gaps = 77/530 (14%)
Query: 20 LFSDINLRFGL-ERVGLVGRNGVGKTTLLKLITGELLPSTGTVSL--SGRIGVLRQSVQV 76
LF +I+++FG R GL+G NG GK+T +K+++GEL PS G VS + R+ L Q
Sbjct: 16 LFENISVKFGEGNRYGLIGANGCGKSTFMKILSGELEPSGGNVSYDPNERVAKLNQDQFA 75
Query: 77 GDDETIADLF-----------EARHALHVLSRA--QAGM--ATLE-ELGDVD-WMLEERI 119
++ T+ D + R ++ L + GM A LE E ++D +M E +
Sbjct: 76 YEEFTVIDTVIMGHKELWKVKQERDRIYALPEMTEEDGMRVADLEVEFAEMDGYMAESKA 135
Query: 120 AEALAVVGLDTSPLTPL-SALSGGQRTRAALAAQIHAVPDFLILDEPTNNLDRDSRMFLV 178
E L VG+ L S+++ G + R LA + A PD ++LDEPTNNLD D+ +L
Sbjct: 136 GELLLAVGIPLEQHYGLMSSVAPGWKLRVLLAQILFADPDIMLLDEPTNNLDIDTIRWLE 195
Query: 179 DFLAVWRGGAIVVSHDRELLETLDAIVEMNTLGAMR-YGGKWSHYRAQKVLELAAAEQDI 237
D L I++SHDR L ++ + G +R Y G + Y + AA Q
Sbjct: 196 DTLNARNCTMIIISHDRHFLNSVCTHMADLDYGELRIYPGNYDEY-------MTAATQ-- 246
Query: 238 ASAEKRLSE-VRKKSQEA-LERKARRDAKGAAKAAKGDMPRIAAGGMKRRAEKTSGDNAN 295
+ E+ LS+ +KK+Q A L+ R + A+KA + A R+ +K D
Sbjct: 247 -ARERLLSDNAKKKAQIAELQTFVARFSANASKAKQ-------ATSRARQIDKIKLDEVK 298
Query: 296 LASR----LKTEAADDLRTARERIEILQDVTVTLPPSGLHATKTVLSLQGLTAGYFPENP 351
+SR ++ E + +L + L ++ L+ G+ ++
Sbjct: 299 ASSRQNPFIRFEQSKEL------------------------FRNALIVENLSQGF--DHD 332
Query: 352 VLKDLSFEITGPQRVAVTGPNGSGKTTLLSVITGDLEPFAGSVYLGVS---GAFLDQQVS 408
+ + + +RVA+ G NG GKTTLL+ + G LEP +G + G +
Sbjct: 333 LFSNFNAIFEVGERVAIIGENGVGKTTLLNTLAGVLEPRSGMYKWSENSNIGYYAQDHAH 392
Query: 409 LLDATLSIRDNFLRLNPQ-SGENACRAALARFMFRADAALRIVGTLSGGQMLRAGLACVL 467
L++ + + + E R+ L R +F D + V LSGG+ R L ++
Sbjct: 393 EFAEDLNLMEWMGQWRQEGDDEQVVRSFLGRMLFGQDDIKKSVKVLSGGEQGRMLLGKLM 452
Query: 468 GGPQPPQLLILDEPTNHLDIDSITAVEAGLRAYDGALLVVSHDEAFLSGI 517
P +L+LDEPTNH+D++SI ++ L Y G L VSHD F+ +
Sbjct: 453 --MHKPNMLLLDEPTNHMDMESIESLNNALEQYKGTLFFVSHDRVFVDSL 500
Score = 73.6 bits (179), Expect = 2e-17
Identities = 64/216 (29%), Positives = 102/216 (47%), Gaps = 21/216 (9%)
Query: 18 HLLFSDINLRFGL-ERVGLVGRNGVGKTTLLKLITGELLPSTGTVSLS--GRIGVLRQSV 74
H LFS+ N F + ERV ++G NGVGKTTLL + G L P +G S IG Q
Sbjct: 331 HDLFSNFNAIFEVGERVAIIGENGVGKTTLLNTLAGVLEPRSGMYKWSENSNIGYYAQD- 389
Query: 75 QVGDDETIADLFEARHALHVLSRAQAGMATLEELGDVDWMLEERIAEALAVVGLDTSPLT 134
E L+++ M + GD + ++ + L G D +
Sbjct: 390 ---------HAHEFAEDLNLME----WMGQWRQEGDDEQVVRSFLGRML--FGQDDIKKS 434
Query: 135 PLSALSGGQRTRAALAAQIHAVPDFLILDEPTNNLDRDSRMFLVDFLAVWRGGAIVVSHD 194
+ LSGG++ R L + P+ L+LDEPTN++D +S L + L ++G VSHD
Sbjct: 435 -VKVLSGGEQGRMLLGKLMMHKPNMLLLDEPTNHMDMESIESLNNALEQYKGTLFFVSHD 493
Query: 195 RELLETL-DAIVEMNTLGAMRYGGKWSHYRAQKVLE 229
R +++L I+E+ + G ++ + + +E
Sbjct: 494 RVFVDSLATRIIEIRDGKITDFKGTYAEFLKSRGVE 529
Score = 69.3 bits (168), Expect = 3e-16
Identities = 55/210 (26%), Positives = 95/210 (45%), Gaps = 41/210 (19%)
Query: 347 FPENPVLKDLSFEITGPQRVAVTGPNGSGKTTLLSVITGDLEPFAGSVYLGVS------- 399
F P+ +++S + R + G NG GK+T + +++G+LEP G+V +
Sbjct: 11 FGAKPLFENISVKFGEGNRYGLIGANGCGKSTFMKILSGELEPSGGNVSYDPNERVAKLN 70
Query: 400 -GAFLDQQVSLLDATL----------SIRDNFLRLNPQSGENACRAALARFMF------- 441
F ++ +++D + RD L + E+ R A F
Sbjct: 71 QDQFAYEEFTVIDTVIMGHKELWKVKQERDRIYALPEMTEEDGMRVADLEVEFAEMDGYM 130
Query: 442 ---RADAALRIVG-----------TLSGGQMLRAGLACVLGGPQPPQLLILDEPTNHLDI 487
+A L VG +++ G LR LA +L P +++LDEPTN+LDI
Sbjct: 131 AESKAGELLLAVGIPLEQHYGLMSSVAPGWKLRVLLAQILFA--DPDIMLLDEPTNNLDI 188
Query: 488 DSITAVEAGLRAYDGALLVVSHDEAFLSGI 517
D+I +E L A + ++++SHD FL+ +
Sbjct: 189 DTIRWLEDTLNARNCTMIIISHDRHFLNSV 218