Pairwise Alignments

Query, 600 a.a., ABC transporter permease from Agrobacterium fabrum C58

Subject, 611 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

 Score =  295 bits (754), Expect = 5e-84
 Identities = 183/485 (37%), Positives = 278/485 (57%), Gaps = 26/485 (5%)

Query: 120 STDWHANSFAGSTVRKITRG-------MWALDSLNDLLLVALLPSIVMLVGATVVLGSYW 172
           S  +    FAG    K+ +        +  L  L+  + V ++  +VM+  A  +L    
Sbjct: 131 SIGFFQRDFAGRVATKVMQNANSVRETVLKLVDLSVYIAVYMVSMLVMIAEADKIL---- 186

Query: 173 PVMGLIVGLGSLIYIGVTVGLSMGYVSPAARLANAWDTRLGGALADAISCNAVVKAFGAE 232
            V+ ++V L  L YI + V       + +   ANA  +++ G + D  +    VK F   
Sbjct: 187 -VVPILVWL--LFYIAIQVYFVPRLKTISTDQANA-QSQMTGRIVDTYTNITTVKLFSHS 242

Query: 233 TREETRLGHVLVKWDNRTRRTWKRGTLNGTIQSFMMVS--MQAGILGTGLIMWQKGLATA 290
            RE T     + ++ +   R  +  TL   + S  +++  +   I    + +W     T 
Sbjct: 243 QRETTYAKSGMKQFLHTVYRQMR--TLTSLLYSVDLINYLLLFSIAALSIQLWLAETVTV 300

Query: 291 GDITFVLAMFFVLQGYLRDVGQDIRNLQRAVNDMEELVLLDKMPLGVEDRPDAKRINIGK 350
           G I   + +   +QG  + +  +IR L  +V  + + +     P+ +EDRP AK + +  
Sbjct: 301 GVIAIGITIALRMQGMSKWIMWEIRALFESVGTVIDSMNTIANPVEIEDRPQAKSLQVKF 360

Query: 351 GEIVFDHVTFQYGAHATPLYEDFSVTIKPGERVGLVGHSGSGKTTFVKLIQRLYDIKAGA 410
           GE+ F  V F Y A  T +++D ++ I+ GE+VG+VG SG+GK+T V L+ R YD+++G 
Sbjct: 361 GELSFSQVRFGYSAQKT-VFDDLNLVIQAGEKVGIVGRSGAGKSTLVNLLLRFYDVQSGQ 419

Query: 411 IRIDGQNIADVTQASLRGQIAIVQQEPILFHRTLAENIAYGRPDASRREIEQAAKQASAH 470
           IRIDGQ+I+ V+Q SLR  I ++ Q+  L HR++ +NI YG PDA +  IE+AA+QA AH
Sbjct: 420 IRIDGQDISHVSQESLRRHIGMITQDTSLLHRSIRDNILYGNPDADQAAIEEAARQAHAH 479

Query: 471 DFIMSLPK-----GYETMVGERGVKLSGGERQRVAIARAFLADAPVLILDEATSSLDSES 525
           DFI  L       GY+  VGERGVKLSGG+RQR+AIAR  L +AP+LI+DEATS+LDSE 
Sbjct: 480 DFIQELQDEQGRTGYDVQVGERGVKLSGGQRQRIAIARVLLKNAPILIMDEATSALDSEV 539

Query: 526 EVQIQQAMERLMDGRTTLVIAHRLSTVRALDRLLVFDKGRIVEEGDHQALIRLHDGIYRR 585
           E  IQ+ +  LM G+T + IAHRLST+ A+DRL+V D+G+IVE+G HQ L+  H GIY +
Sbjct: 540 ESAIQENLHTLMAGKTVIAIAHRLSTIAAMDRLIVMDEGKIVEQGTHQELL-AHKGIYAQ 598

Query: 586 LFERQ 590
           L+  Q
Sbjct: 599 LWAHQ 603