Pairwise Alignments

Query, 600 a.a., ABC transporter permease from Agrobacterium fabrum C58

Subject, 604 a.a., MsbA-like saccharide exporting ABC transporter ATP-binding/permease subunits from Sinorhizobium meliloti 1021

 Score =  820 bits (2119), Expect = 0.0
 Identities = 414/600 (69%), Positives = 491/600 (81%), Gaps = 1/600 (0%)

Query: 1   MSRKKLDFRADAYRHVLGFVFNHWSHRKALVGFIIVLVVASTLAEVMVPVFSGRIVDA-I 59
           M+  +   R  A+R V  F ++HW  +   +  +++ V+ STLA+V+ P++SGR+VDA I
Sbjct: 1   MAFTRFTARNRAFRSVFRFSWDHWKKQPVRLAALLLTVLLSTLADVLTPLYSGRLVDAVI 60

Query: 60  AGDNGGANAGDGALRAFVIVVALGFTSVVLRWFIFNGIIRLTLKTMADVTNNGFHKVQRF 119
           +G      A + A+ AF++++AL F +++LR   F GI+ LTLK M+D+    FH +QRF
Sbjct: 61  SGAASDDVAWNAAMAAFMMLMALSFGAIILRHVTFMGIVSLTLKMMSDIAAAAFHHIQRF 120

Query: 120 STDWHANSFAGSTVRKITRGMWALDSLNDLLLVALLPSIVMLVGATVVLGSYWPVMGLIV 179
           S+DWHANSFAGSTVRK+TRGMWALD LND LLVAL PSIVMLVG+T ++  YWP+MG+I+
Sbjct: 121 SSDWHANSFAGSTVRKVTRGMWALDLLNDTLLVALFPSIVMLVGSTALMAWYWPMMGVII 180

Query: 180 GLGSLIYIGVTVGLSMGYVSPAARLANAWDTRLGGALADAISCNAVVKAFGAETREETRL 239
           GLGS+ +I VTV LS+GYV+P A LAN+WDTRLGGALADA+SCN VVKAFGAE RE+ RL
Sbjct: 181 GLGSIAFIAVTVSLSLGYVAPMASLANSWDTRLGGALADAVSCNTVVKAFGAEGREDARL 240

Query: 240 GHVLVKWDNRTRRTWKRGTLNGTIQSFMMVSMQAGILGTGLIMWQKGLATAGDITFVLAM 299
             VL KW+NRTRRTW RGTLNGT Q  M++ ++A ++G  L++W +G ATAGDITFVL  
Sbjct: 241 AKVLRKWENRTRRTWSRGTLNGTAQGAMLLVLRAAVIGFALLLWARGQATAGDITFVLTS 300

Query: 300 FFVLQGYLRDVGQDIRNLQRAVNDMEELVLLDKMPLGVEDRPDAKRINIGKGEIVFDHVT 359
           FF+LQGYLR+VG  IRNLQR++NDMEELV +   PLGVEDRP AK I I +GEI F  VT
Sbjct: 301 FFILQGYLREVGMHIRNLQRSINDMEELVAIHAQPLGVEDRPGAKPIRITEGEIEFRDVT 360

Query: 360 FQYGAHATPLYEDFSVTIKPGERVGLVGHSGSGKTTFVKLIQRLYDIKAGAIRIDGQNIA 419
           F YGAH  PLYE FSV I  GERVGLVGHSGSGKTTF+KLIQRL+D+ AG IRIDGQNIA
Sbjct: 361 FHYGAHRAPLYEGFSVNIAAGERVGLVGHSGSGKTTFIKLIQRLHDLNAGEIRIDGQNIA 420

Query: 420 DVTQASLRGQIAIVQQEPILFHRTLAENIAYGRPDASRREIEQAAKQASAHDFIMSLPKG 479
           D TQASLR QIAIVQQEPILFHR+LAENIAY RP A++R+IE+AA+ ASAHDFI +LPKG
Sbjct: 421 DFTQASLRQQIAIVQQEPILFHRSLAENIAYARPGATQRDIEEAARLASAHDFIAALPKG 480

Query: 480 YETMVGERGVKLSGGERQRVAIARAFLADAPVLILDEATSSLDSESEVQIQQAMERLMDG 539
           Y T+VGERGVKLSGGERQRVAIARAFLADAP+LILDEATSSLDSESEV IQQAMERLM G
Sbjct: 481 YGTLVGERGVKLSGGERQRVAIARAFLADAPILILDEATSSLDSESEVLIQQAMERLMTG 540

Query: 540 RTTLVIAHRLSTVRALDRLLVFDKGRIVEEGDHQALIRLHDGIYRRLFERQALELTKGLV 599
           RTTLV+AHRLSTVRALDRLLVFD+GRI EEGDH ALIR+  GIYR LFERQALELTKGL+
Sbjct: 541 RTTLVVAHRLSTVRALDRLLVFDRGRIAEEGDHGALIRVKGGIYRSLFERQALELTKGLI 600