Pairwise Alignments

Query, 600 a.a., ABC transporter permease from Agrobacterium fabrum C58

Subject, 602 a.a., ABC transporter, ATP-binding protein from Phaeobacter inhibens DSM 17395

 Score =  304 bits (779), Expect = 6e-87
 Identities = 197/574 (34%), Positives = 301/574 (52%), Gaps = 13/574 (2%)

Query: 24  WSHRKALVGFIIVLVVASTLAEVMVPVFSGRIVDAIAGDNGGANAGDGALRAFVIVVALG 83
           W   +A V + +V  +A  +   +V V++  +         G      AL A  + VA G
Sbjct: 28  WPEGQAWVKYRVVAALAVLILAKLVAVYTPMLYKGAVDSLAGEGVPPLALGAVGLTVAYG 87

Query: 84  FTSVVLRWF------IFNGIIRLTLKTMADVTNNGFHKVQRFSTDWHANSFAGSTVRKIT 137
              ++   F      +F  + +  L+ +A  T   F  + R S  +H     G   R I 
Sbjct: 88  MARILTNGFQQLRDAVFAPVGQRALRRLALET---FRHIHRLSMRYHITRKTGGLSRIIE 144

Query: 138 RGMWALDSLNDLLLVALLPSIVMLVGATVVLGSYWPVMGLIVGLGSL-IYIGVTVGLSMG 196
           RG+  ++ L   LL ++ P ++ L    ++L   + +  L+V   ++  Y+  T  ++  
Sbjct: 145 RGVKGVEFLLRFLLFSIGPLVLELALVAIILAVLFDIWYLVVVAVTIGFYVWFTFAITEW 204

Query: 197 YVSPAARLANAWDTRLGGALADAISCNAVVKAFGAETREETRLGHVLVKWDNRTRRTWKR 256
            V    R  N  DT       D++     VK FGAE RE  R    +  +     +T   
Sbjct: 205 RVK-LRREMNKQDTDANQKAIDSLLNYETVKYFGAEDRETERYDVAMRAYAKAALKTAYS 263

Query: 257 GTLNGTIQSFMMVSMQAGILGTGLIMWQKGLATAGDITFVLAMFFVLQGYLRDVGQDIRN 316
                  QS ++      ++    I  Q+G  T GD   V A    +   L  +G   R 
Sbjct: 264 LAFLNFGQSLVITGGLVAVMVMAAIGVQQGNLTVGDFVMVNAYMIQITVPLNFLGTVYRE 323

Query: 317 LQRAVNDMEELVLLDKMPLGVEDRPDAKRINIGKGEIVFDHVTFQYGAHATPLYEDFSVT 376
           +++++ DM E+  L +    V+DR +AK + +  G I  ++V F Y +    L +  S  
Sbjct: 324 IRQSLVDMGEMFDLIEQDPDVKDRDNAKVLQVNGGAITLENVEFGYDSDRQIL-KGVSFE 382

Query: 377 IKPGERVGLVGHSGSGKTTFVKLIQRLYDIKAGAIRIDGQNIADVTQASLRGQIAIVQQE 436
           +  G  V +VG +GSGK+T  +L+ R YD+  GA+RIDGQ++ DVTQ SL   I +V Q+
Sbjct: 383 VAAGHTVAIVGSTGSGKSTIGRLLFRFYDVTRGALRIDGQDVRDVTQKSLHAAIGVVPQD 442

Query: 437 PILFHRTLAENIAYGRPDASRREIEQAAKQASAHDFIMSLPKGYETMVGERGVKLSGGER 496
            +LF+ T+  NIAYGR  A++ E+EQAA+ A  HDFIM LP+GYET VGERG+KLSGGE+
Sbjct: 443 TVLFNDTIRYNIAYGRAGATQEEVEQAARDAQIHDFIMRLPEGYETQVGERGLKLSGGEK 502

Query: 497 QRVAIARAFLADAPVLILDEATSSLDSESEVQIQQAMERLMDGRTTLVIAHRLSTVRALD 556
           QRV IAR  L + P+L+LDEATS+LDS++E +I++A+ R   GRT + IAHRLSTV   D
Sbjct: 503 QRVGIARTLLKNPPILLLDEATSALDSDTEQEIKEALSRAGQGRTVITIAHRLSTVAEAD 562

Query: 557 RLLVFDKGRIVEEGDHQALIRLHDGIYRRLFERQ 590
           +++V ++G I E G H  L+   DG Y  L++RQ
Sbjct: 563 QIIVLEQGEIAERGTHDELL-AKDGRYAHLWQRQ 595