Pairwise Alignments

Query, 603 a.a., ABC transporter permease from Agrobacterium fabrum C58

Subject, 550 a.a., ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021

 Score =  477 bits (1227), Expect = e-139
 Identities = 269/566 (47%), Positives = 364/566 (64%), Gaps = 32/566 (5%)

Query: 4   KPVLSVRNLTTSFLVDGEWKSVVRDVSFDVKSGETVAIVGESGSGKSVTSLSLMRLL-AP 62
           KP+L +  LT  FL +G+    V DVSFDV  GET+ I+GESGSGKSV++ ++M L+  P
Sbjct: 6   KPILRIDKLTVDFLSEGDPVRAVDDVSFDVCPGETLVILGESGSGKSVSTGTVMGLIDCP 65

Query: 63  ASSHIEGEVLLNGRNLLTLSEREMRGVRGNDISMIFQEPMTSLNPIFTIGRQISEVLIRH 122
               + G ++ +G +L  L +   R + G  I+MIFQ+P+  LNP++T+GRQI+EV   H
Sbjct: 66  PGDIVSGSLVFDGTDLSRLDDEGRRELNGRRIAMIFQDPLAYLNPVYTVGRQIAEVFESH 125

Query: 123 KGLSKQEARAETVRLLEKVRIPNAASRFDEYPHQFSGGMRQRVMIAMALASRPKLLIADE 182
                   R + VRLLE+V IP A  R D YPHQFSGG RQRVMIAMA+A +P +LIADE
Sbjct: 126 GEGEGGAVRDKVVRLLERVGIPEADERIDYYPHQFSGGQRQRVMIAMAIALKPDILIADE 185

Query: 183 PTTALDVTIQGQILDLIKLLQEEEGMSVLFITHDMGVVAEIADRTIVMYRGDAVETGATE 242
           PTTALDV++Q QIL+L++ LQ E GM+++ ITHD+ V A +ADR IVM  G  VE+G  E
Sbjct: 186 PTTALDVSVQAQILELLRDLQRETGMALIMITHDLEVAAAMADRIIVMNGGKVVESGKAE 245

Query: 243 DIFRRGQHPYTRALLSAVPKLGSMHDRQWPTRFPVLDLKTGLSTEPQEVAETVACGQTPV 302
           D+F    H YTR L+SAVP                         +  +     A G+  +
Sbjct: 246 DVFTNPSHAYTRRLMSAVP-----------------------HADAPKAPRNAAQGEV-L 281

Query: 303 LSVKNLVTRFPIRSGLWARQTGAVHAVENVSFDLFQGETLSLVGESGCGKSTTGRSIMRL 362
           L V +L   + + SG ++ +     AV++VSF L +GET+ +VGESG GKS+  R ++RL
Sbjct: 282 LQVAHLSKHYKLGSGPFSPKR-EFRAVDDVSFTLRRGETVGIVGESGSGKSSIARMLLRL 340

Query: 363 VEPSSGDVSLDGYDVMRLDTVGLRNMRKSVQMIFQDPFSSLNPRMTVGTAISEPFIKHR- 421
            EP+SG     G D+  L    L   R+ VQM+FQDPF S+NPRM V + ISEP+  HR 
Sbjct: 341 NEPTSGAALFAGEDIFELKGKALDGFRRRVQMVFQDPFGSMNPRMNVRSIISEPWAIHRD 400

Query: 422 LGSTKQAKEKTADLLEKVGLSADMANRYPHEFSGGQRQRIAIARALALDPKVIVADESVS 481
           +   ++  E+  +LLE VGL A+ A R+PH+FSGGQRQRIAIARALA +P++IV DE+VS
Sbjct: 401 ILPRERWNERVVELLELVGLKAEHAARHPHQFSGGQRQRIAIARALASEPELIVCDEAVS 460

Query: 482 ALDVSIKAQVCNLLLDLQQSLNLAFLFISHDMAVVERVSHRVAVMYLGEIVEIGPRAAVF 541
           ALDVSI+ QV  LL DL+Q L L+++FI+HD+ +V + + R+ VM  G IVE G   A+F
Sbjct: 461 ALDVSIQMQVIELLADLRQRLGLSYVFITHDLPIVRQFADRILVMQRGRIVEEGETEALF 520

Query: 542 DNPQHPYTKKLMAAVPVP-----DPA 562
            +PQH YT+ L+ AVP P     DPA
Sbjct: 521 VSPQHEYTQALLRAVPQPKWLRSDPA 546