Pairwise Alignments

Query, 268 a.a., dipeptide ABC transporter permease from Agrobacterium fabrum C58

Subject, 302 a.a., Binding-protein-dependent transport systems inner membrane component (NCBI) from Rhodospirillum rubrum S1H

 Score =  223 bits (567), Expect = 5e-63
 Identities = 106/266 (39%), Positives = 164/266 (61%), Gaps = 2/266 (0%)

Query: 4   NKSALAGLIIVLFFAVLAIAAPILPIADPVATSWSAIRKAPSAAH--WLGTDDLGRDILS 61
           N++A+  L+I++    LA+  P+L         W AI+  P  A+  W GTD  GRD+  
Sbjct: 36  NRAAMTSLVILIAILALAVVGPLLSPHPYDEIYWEAIQMPPDFANGFWFGTDGNGRDLFV 95

Query: 62  RMIYGARASLMAGVVSVMIAVVIGVPFGLIAGYFGGWVDMVISRITEALLAMPFLIMAIA 121
           R +YGAR SL  GV++  +++VIGV +G IAGYFGG VDM++ R  + L ++PF+   I 
Sbjct: 96  RTLYGARVSLAVGVIATTVSLVIGVVYGAIAGYFGGRVDMLMMRFVDVLYSLPFMFFVIM 155

Query: 122 LAAFLGPSLTNAMIAIGLSAMPIFVRLTRGQVLAVKMEDYVEGARSIGLNHIDIMTRYIL 181
           L    G ++    +A+G        R+ RGQ +AV  ++++E A +IG++   I+ R+++
Sbjct: 156 LMVVFGRNIFLIFVALGAVEWLTMARIVRGQTMAVTRKEFIEAAHAIGVSDATIIRRHVI 215

Query: 182 PNVFAPIIVQATLTVATAIIAEASLSFLGLGQQAPAPSWGSMLNTAKNFLSQAPWMTLWP 241
           PN+  P+IV ATLT+   ++ E+ LSFLGLG Q P  SWG +++     L  +PWM L+P
Sbjct: 216 PNILGPVIVYATLTIPQVVLTESFLSFLGLGVQEPLTSWGVLISEGARVLEVSPWMLLFP 275

Query: 242 GIAIFLVVIGFNLLGDGLRDALDPRE 267
              + L ++ FN +GDGLRDALDP++
Sbjct: 276 AFFLALTLLCFNFIGDGLRDALDPKD 301