Pairwise Alignments

Query, 452 a.a., two component sensor kinase from Agrobacterium fabrum C58

Subject, 445 a.a., integral membrane sensor signal transduction histidine kinase (RefSeq) from Shewanella loihica PV-4

 Score =  170 bits (430), Expect = 1e-46
 Identities = 126/446 (28%), Positives = 225/446 (50%), Gaps = 15/446 (3%)

Query: 11  SISRRLTVFSVIFVTASVMIASIILYLIVAGVVREQIDQRLDTQIEGLRSALSIDEAGRV 70
           SI  +L+++    V  S  +A +I   ++     + I  RL+  +E +  A+  D  G +
Sbjct: 3   SIRTKLSLWLSALVIISTFVAIVIFESMLRQAFHDSIIDRLEEDLEQVLLAIQFDN-GDI 61

Query: 71  TLNAALDGPPFDRRGSGWYWQIRGEGVAITSRSLAGQSLDNPPSPFNWGKMME-HGPRPG 129
           +++       +    SG Y+Q+  + + + SRSL  Q L+  P      ++ +  GP+  
Sbjct: 62  SIDPNQVSNFYKPVYSGRYYQLNLKDIELRSRSLWDQRLEIEPLSKGQTRVWQTKGPQ-- 119

Query: 130 VNAELHGQDLYLRSIQTMVGAKLIEITATAPRFALVAPARSALLWLIPAMTLLGASLVAG 189
            N ++    L L S    V A L      +    + +      L +  AM L   ++VAG
Sbjct: 120 -NHDIQLLSLGLSSADAKVQATLTVAQDLSIGRQVFSQVYGTKLSVNLAMLL---TMVAG 175

Query: 190 IFLQVRYGLRPLRQLTADISSISAGTLERLPDADVQ-ELRPASREINRLVEQNSERLTET 248
           IF+ +R   +P+  +   +  +  G +  L  + +  EL P ++  N L++ +S+++  +
Sbjct: 176 IFILLRQSFKPINDMQRALMKLREGEITALDTSKIPPELAPLAQTYNELLQYSSKQMERS 235

Query: 249 RLHFANLAHGLKTPVTSLYLALN--DTNDPD--NTMRALVDRIDQRIRHHLARARKTAAG 304
           R +  NL+HGLKTP+  +   +      DP+  + M++ +D+I + I   LA AR T   
Sbjct: 236 RNNLGNLSHGLKTPLAVMQQQVEVLGLKDPEAASAMQSQLDQIHKMIERKLAAARITGDM 295

Query: 305 GVAATTPVRPRVDDILEIMTHIYADRGVVATVEVDDTL-RVQVGPEDLDEIIGNITDNAF 363
             AA   +   + D+ + +T ++  + +     +D+ L R+ +  ED  E+IGN+ DNAF
Sbjct: 296 LPAAQMQLPKDLQDLAQTLTKVHGHKAIACEFSLDERLSRLPIHREDGMELIGNLLDNAF 355

Query: 364 KWAKGRVRISARQTGRDILLTISDDGPGIDNALVSEVFEPGRRMDETVPGDGFGLTIVKE 423
           KWA  +V +S  QT   ILLTI DDGPG+ +  +S + + G+R+DE + G G GL+IVK+
Sbjct: 356 KWADSKVAVSTAQTDEQILLTIEDDGPGVADEALSLLTQRGKRLDEAIMGHGLGLSIVKD 415

Query: 424 LVELHGGRISMERNGD-GGLTCLLTL 448
           + E +   ++ E +   GGL   L L
Sbjct: 416 IAEQYEISLAFEHSQQLGGLKITLGL 441