Pairwise Alignments

Query, 550 a.a., MFS permease from Agrobacterium fabrum C58

Subject, 410 a.a., MFS transporter from Vibrio cholerae E7946 ATCC 55056

 Score =  132 bits (331), Expect = 3e-35
 Identities = 119/455 (26%), Positives = 190/455 (41%), Gaps = 73/455 (16%)

Query: 36  AALAIHLCIGMAYGFSVFWLPLSKALPATDPSCSSLTLMGALFTTECNWRVADLGWIYTL 95
           A   I+LC+G+ Y +SVF    +KAL                  T+  W  AD    Y +
Sbjct: 13  AGFCINLCLGILYAWSVF----NKAL-----------------VTDFGWSAADASSPYAI 51

Query: 96  FFVLLGCSAAIWGGWLERVGPRKAGFVSACCWCGGILVAAIGVATHQLWLMWLGAGVIGG 155
             +       + G   +R+GPR    +       G+ + A G A+  L L  L  GV+ G
Sbjct: 52  ATIAFSVCLLVAGILQDRMGPRNILILGTTLT--GLGMIASGFASSVLMLN-LTFGVMTG 108

Query: 156 VGLGLGYISPVSTLIKWF-PDRRGMATGMAIMGFGGGAMIGAPLANLLMNTFKTEASIGV 214
            G+G GY     + +KWF P ++GM  G+   GFG  A+  APL + L+        +G+
Sbjct: 109 AGIGFGYACLSPSAMKWFHPSKKGMVNGLIAAGFGLAAIYLAPLTSALIT------HLGI 162

Query: 215 WQTFVVMALVYFAFMMAGAFGYRIPPAGWRPEGWTAPAAKSAMITTRHVHL--RDAHKTP 272
             +F+++     A  +  A     PPAG+ P      A + A +  +  +L  +   KTP
Sbjct: 163 QTSFMILGAGVLAIAVPLACTINNPPAGYVPAEPKLKAGQEAKVVAKVANLSWKAMLKTP 222

Query: 273 QFWLIWAVLCLNVSAGIGVIGMASPMLQEIFAGSLIGLPGVGFADLDAGQKAQIAAIAAG 332
           QF+ +W +  L  S G+ +IG  + +     A     LP                  A  
Sbjct: 223 QFYALWLMYALAASVGLMIIGNITNI-----ASVQANLPN-----------------AVY 260

Query: 333 FTGLLSLFNIGGRFFWASMSDKIGRKNTYFCFFVL---GIILYALAPTLATMGNKALFVL 389
              +L++FN GGR     +SDKIG   T    F+L    ++L+A      T  ++   ++
Sbjct: 261 LASILAIFNSGGRVAAGILSDKIGGVRTLLLAFLLQGGNMVLFA------TFDSEFTLII 314

Query: 390 AFGIILSMYGGGFATIPAYLADIFGTQFVGAIHGRLLTAWATAGIAGPVVVNYIREAQIA 449
              I    YG   A  P+  A+ +G +  G  +G L T+W   G  G  VV Y       
Sbjct: 315 GTAIAAVGYGTLLAVFPSITAEFYGLKNYGTNYGVLYTSWGIGGAIGAAVVGY------- 367

Query: 450 AGVAPGPALYTSTMYILAGMLAIGLIANAFVRPLA 484
             +  G   Y     I A M+A+ ++     +P++
Sbjct: 368 -SMTHGGG-YNLAYTISAAMMAVCILLALITKPIS 400