Pairwise Alignments

Query, 960 a.a., formate dehydrogenase alpha subunit from Agrobacterium fabrum C58

Subject, 674 a.a., formate dehydrogenase H subunit alpha selenocysteine-containing from Methanococcus maripaludis S2

 Score =  491 bits (1263), Expect = e-143
 Identities = 266/682 (39%), Positives = 391/682 (57%), Gaps = 24/682 (3%)

Query: 254 TTCAYCGVGCSFKAEMRGEELVRMVPWKDGQANRGHSCVKGRFAYGYATHRDRILNPMIR 313
           T C YCG GC     ++   LV   P+K    N G +C+KG + + +    DR+  P+IR
Sbjct: 8   TICPYCGTGCGVDLVVKDGTLVGTNPFKRHPVNEGKTCIKGSYCHEFVHRDDRLKTPLIR 67

Query: 314 ENIGDPWREVSWDAAFAYVASEFRRIQGKYGRESIGGITSSRCTNEETFLVQKLVRAGFG 373
           +N      E SWD A   ++ + +     Y  E +G  +S+RCTNE+ ++ QK  R    
Sbjct: 68  KN--GELVEASWDEALELISGKLQN----YSPEEVGFFSSARCTNEDNYVFQKFARTVIK 121

Query: 374 NNNVDTCARVCHSPTGYGLGQAFGTSAGTQNFDSVEQSDVVLVIGANPTDGHPVFGSRLK 433
            NNVD CAR+ HS T  GLGQAFG+ A T +   +E +D + +IG+N  + HP+   R+ 
Sbjct: 122 TNNVDHCARL*HSATVVGLGQAFGSGAMTNSISDIEDADCIFIIGSNTFEQHPLIARRVV 181

Query: 434 KRLRQGAKLIVIDPRRIDLVRTPHVEAAFHLPLLPGTNVAVLTALAHVIVTEGLFNEAFI 493
           +   +G K+IVIDPR     +    +A  +L LLPGTN+AVL A+ HV+V E L +E FI
Sbjct: 182 RAKEKGTKIIVIDPRYTPTAK----QADLYLQLLPGTNIAVLNAIMHVLVKENLVDEEFI 237

Query: 494 RERCDWSEFEDWAAFVAEPQHSPEETERFTGVPAEDLRGAARLYATGGNGAIYYGLGVTE 553
           + R     +E+    +    ++PE   + +GV  E +  AA++Y +    +I Y +G+T+
Sbjct: 238 KNRT--KGYEELKTTLET--YTPEYASKLSGVAPELIVEAAKMYGSANAASILYCMGITQ 293

Query: 554 HSQGSTTVMAIANLAMVTGNIGRPGVGVNPLRGQNNVQGSCDMGSFPHELPGYRHISDDA 613
            + G   V +  NLAM+TGNIG+PG GVNPLRGQNNVQG+CDMG+ P+  PGY+ +   A
Sbjct: 294 FTTGVNNVKSCCNLAMITGNIGKPGTGVNPLRGQNNVQGACDMGALPNVFPGYQAV--PA 351

Query: 614 TRDVFEKLWGVKLNNEPGLRIPNMLDAAVDGSFKGIYIQGEDILQSDPDTKHVSAGLAAM 673
             + + + W   ++   GL IP+ML A      K IY+ GE+ + SDPD  HV   L ++
Sbjct: 352 NHEKYAEAWNTCVDPNVGLSIPDML-AKAGEQVKCIYVMGENPMVSDPDIHHVEHALKSL 410

Query: 674 ECVVVHDLFLNETANYAHVFLPGSTFLEKDGTFTNAERRINRVRK-VMSPKNGYADWEVT 732
           + ++V D+FL ETA  A V LPG+++ EKDGTF+N ERRI ++ K V SP    ADW++ 
Sbjct: 411 DLLIVQDIFLTETAQVADVVLPGASWAEKDGTFSNTERRIQKINKAVDSPGEAIADWKIV 470

Query: 733 QKLAQAMGL--TWNYTHPSEIMDEIAATTPSFASVSYAYLEEKGSVQWPCNEKFPEGSPI 790
           + LA+ MG    +N+    E+  EIA  TP +A V+Y  L   G + WPC      G+PI
Sbjct: 471 KMLAEKMGQGELFNFNTAEEVFQEIAKVTPQYAGVTYERLGVDG-LHWPCKTCEDPGTPI 529

Query: 791 MHVDGFVR--GKGKFIRTEYVATDERTGPRFPLLLTTGRILSQYNVGAQTRRTENVVWH- 847
           +H +  +   G G     +Y   DE     +P+ LTTGRI+  Y+ G  TRR++++    
Sbjct: 530 LHCEKCLTPDGLGNIFAIDYADPDEMADSEYPMTLTTGRIIFHYHTGTMTRRSKHMADEI 589

Query: 848 EEDRLEIHPHDAEQRGVKDGDWIKLVSRSGDTTLRALITDRVAPGVVYTTFHHPGTQANV 907
            E  +EIHP DAE+ G+K+   +K+ +R G+  + A IT  +  GVV+  FH   T AN+
Sbjct: 590 NEGFVEIHPEDAEKMGIKNKQKVKVSTRRGEVVVNAKITPNIKQGVVFMPFHFAETAANI 649

Query: 908 ITTDFSDWATNCPEYKVTAVQV 929
           +T    D     PEYKV A +V
Sbjct: 650 LTNPAQDPNCKIPEYKVCAAKV 671