Pairwise Alignments

Query, 960 a.a., formate dehydrogenase alpha subunit from Agrobacterium fabrum C58

Subject, 676 a.a., formate dehydrogenase H subunit alpha selenocysteine-containing from Methanococcus maripaludis S2

 Score =  482 bits (1241), Expect = e-140
 Identities = 265/684 (38%), Positives = 396/684 (57%), Gaps = 27/684 (3%)

Query: 254 TTCAYCGVGCSFKAEMRGEELVRMVPWKDGQANRGHSCVKGRFAYGYATHRDRILNPMIR 313
           T C YCG GC     ++  ++V   P+K    N G  C+KG + Y +    DR+  P+I+
Sbjct: 9   TICPYCGTGCGIDLVVKDGKVVDSHPFKRHPVNEGKVCIKGNYCYEFVHSEDRLTKPLIK 68

Query: 314 ENIGDPWREVSWDAAFAYVASEFRRIQGKYGRESIGGITSSRCTNEETFLVQKLVRAGFG 373
           +N    + E +WD A   +A + ++    Y  + +   + +R TNEE++ +QK  R    
Sbjct: 69  KN--GEFIEATWDEALDLIAGKLKQ----YSPDEVAFFSCARGTNEESYALQKFARTVLK 122

Query: 374 NNNVDTCARVCHSPTGYGLGQAFGTSAGTQNFDSVEQSDVVLVIGANPTDGHPVFGSRLK 433
            NNVD CAR+ H+PT  GLG+ FG+ A T +   + Q+DV+L+ G+N  + HP+    + 
Sbjct: 123 TNNVDHCARI*HAPTVVGLGECFGSGAMTNSITDLAQADVLLIYGSNTFEAHPLIARSIV 182

Query: 434 KRLRQGAKLIVIDPRRIDLVRTPHVEAAFHLPLLPGTNVAVLTALAHVIVTEGLFNEAFI 493
           K    G K+I IDPR     +     A  HL L+PG+N+ ++  + ++I+ EG+ +E FI
Sbjct: 183 KAKENGTKIIAIDPRTTHTAKM----ADLHLKLIPGSNIDLINTITNIIIQEGMADEEFI 238

Query: 494 RERCD-WSEFEDWAAFVAEPQHSPEETERFTGVPAEDLRGAARLYATGGNGAIYYGLGVT 552
           + R + + E +D  +     +++ E+T   +G+PAE +  AAR+Y +  N +I Y LGVT
Sbjct: 239 KNRTEGYDELKDVVS-----KYTLEKTAELSGIPAETILEAARMYGSAENASIMYCLGVT 293

Query: 553 EHSQGSTTVMAIANLAMVTGNIGRPGVGVNPLRGQNNVQGSCDMGSFPHELPGYRHISDD 612
           E++ G   V +  NLAMVTGN+GRPG GVNPLRGQNNVQG+CDMG+ P+  PGY+ + + 
Sbjct: 294 EYTFGVDNVKSCCNLAMVTGNLGRPGTGVNPLRGQNNVQGACDMGALPNVFPGYQKVGEA 353

Query: 613 ATRDVFEKLW-GVKLNNEPGLRIPNMLDAAVDGSFKGIYIQGEDILQSDPDTKHVSAGLA 671
             R   E LW    LN E GL  P +L  A +   K ++I GED + +D D  HV   L 
Sbjct: 354 YER--LENLWETADLNREIGLTSPEVLHKAGE-QVKFLHIVGEDPMVADADINHVEKALK 410

Query: 672 AMECVVVHDLFLNETANYAHVFLPGSTFLEKDGTFTNAERRINRVRK-VMSPKNGYADWE 730
           +++  VV D+FL ETA  A V LP + + EKDGTFTN+ERR+ R+RK V +P +   DW 
Sbjct: 411 SLDFFVVQDIFLTETAKLADVVLPAACWAEKDGTFTNSERRVQRIRKAVDAPGDALPDWL 470

Query: 731 VTQKLAQAMGL--TWNYTHPSEIMDEIAATTPSFASVSYAYLEEKGSVQWPCNEKFPEGS 788
           + +KLA+ MG     N+   SEI DE+A   P +A +S+  L   G +QWPC      G+
Sbjct: 471 IVRKLAEKMGAGEKLNFESASEIFDEMAKVIPQYAGMSFERLGIDG-LQWPCKTPEDPGT 529

Query: 789 PIMHVDGFVR--GKGKFIRTEYVATDERTGPRFPLLLTTGRILSQYNVGAQTRRTENVVW 846
           PI+H + F+R  G GKF   E+   DE     +PL+LTTGRI+  YN G  TRR +++  
Sbjct: 530 PILHKEKFLRPNGLGKFTPVEHKDADELIDEEYPLILTTGRIIFHYNSGTMTRRCDSITN 589

Query: 847 H-EEDRLEIHPHDAEQRGVKDGDWIKLVSRSGDTTLRALITDRVAPGVVYTTFHHPGTQA 905
             +E+ +EI+  DA++ G+K G+ +++ SR G     A +T+ V  GVVY +FH      
Sbjct: 590 EIDENFIEINTEDAKELGIKPGEKVRVSSRRGTVNADARVTENVIKGVVYMSFHFLEEAT 649

Query: 906 NVITTDFSDWATNCPEYKVTAVQV 929
           N +T    D  +   E K+ AV+V
Sbjct: 650 NKLTNSAYDPVSKTAELKICAVKV 673