Pairwise Alignments

Query, 518 a.a., NADH ubiquinone oxidoreductase chain F from Agrobacterium fabrum C58

Subject, 431 a.a., NADH dehydrogenase from Herbaspirillum seropedicae SmR1

 Score =  285 bits (730), Expect = 2e-81
 Identities = 154/394 (39%), Positives = 225/394 (57%), Gaps = 4/394 (1%)

Query: 118 LEDYRNYQGMKGLEKAVT--MEPLAIVAQVTESGLRGRGGAGFPTGIKWKTVADARADQK 175
           LEDY    G + L++ +   + P  ++A +  SGLRGRGGAGFPTG+KW  +      QK
Sbjct: 24  LEDYVKRGGYESLKRILNEKITPEQVIADLKASGLRGRGGAGFPTGLKWSFMPRQFPGQK 83

Query: 176 YIVCNADEGDSGTFADRMIMEGDPFVLIEGMAIAGLAVGATKGFIYTRSEYPYAIKVMEK 235
           Y+VCN DEG+ GTF DR I+  +P  LIEGM I G A+G T G+ Y   E   A +  E+
Sbjct: 84  YLVCNTDEGEPGTFKDRDIIRYNPHALIEGMIIGGYAMGITVGYNYIHGEIFSAYERFEE 143

Query: 236 AIEIARREGILGSSVLGSGRAFDMEVRMGAGAYVCGEETSLLNSLEGKRGTVRAKPPLPA 295
           A+E AR  G LG ++LG+G +F +    G GAY+CGEET+LL SLEGK+G  R KPP PA
Sbjct: 144 ALEEARAAGFLGDNILGTGFSFQLHAHHGYGAYICGEETALLESLEGKKGQPRFKPPFPA 203

Query: 296 LQGLFGKPTVVNNVISLASIPVIMDRGAAFYRDFGVGRSHGTIPIQLAGNIRYGGLYETA 355
             GL+GKPT +NN  + A++P I   G   Y + G   + GT    ++G++   G YE  
Sbjct: 204 SFGLYGKPTTINNTETFAAVPFIFKVGPQAYAEMGKPNNGGTKIFSISGDVERPGNYEIP 263

Query: 356 FGLTLGQLVNDIGGGTITGRPVKAVQVGGPLGAYFPVS-LFDTIFDYEAFTAAGGLIGHA 414
            G     L+ ++ GG   G+ +KAV  GG          + DT  DY+A   AG ++G  
Sbjct: 264 LGTPFSTLL-ELAGGMRGGKKIKAVIPGGSSAPVIRGDVMMDTTMDYDAIAKAGSMLGSG 322

Query: 415 GIVVFDDTADMLHQARFALEFCAVESCGKCTPCRIGSTRGVETVDKIALGIEREKNTALL 474
            ++V D+T  M+        F   ESCG+CTPCR G+      V++I  G  + ++  +L
Sbjct: 323 AVIVMDETRCMVKSLLRLSYFYYEESCGQCTPCREGTGWMYRMVERIENGHGKMEDLDVL 382

Query: 475 EDLCETMKFGSLCALGGFTPYPVMSALRHFPQDF 508
             + + ++  ++CALG     PV + +++F ++F
Sbjct: 383 NSVADNIQGRTICALGDAAAMPVRAFVKNFREEF 416