Pairwise Alignments

Query, 518 a.a., NADH ubiquinone oxidoreductase chain F from Agrobacterium fabrum C58

Subject, 433 a.a., NADH-quinone oxidoreductase, F subunit (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  254 bits (650), Expect = 3e-72
 Identities = 153/410 (37%), Positives = 229/410 (55%), Gaps = 5/410 (1%)

Query: 99  LKNQTRLTFARCGVTDPLSLEDYRNYQGMKGLEKAVTMEPLAIVAQVTESGLRGRGGAGF 158
           L++Q R+     G+ D  +L   R      G +K + M    IV  + +SGLRGRGGAGF
Sbjct: 2   LQDQDRIFTNIYGMHDR-TLAGARKRGHWDGTDKLIQMGRDDIVKIMKDSGLRGRGGAGF 60

Query: 159 PTGIKWKTVA-DARADQKYIVCNADEGDSGTFADRMIMEGDPFVLIEGMAIAGLAVGATK 217
           PTG+KW  +  ++     Y+V NADE + GT  DR IM  DP  LIEG  IA  A+GA  
Sbjct: 61  PTGLKWSFMPKESDGRPHYLVVNADESEPGTCKDREIMRHDPHTLIEGCLIASFAMGAHA 120

Query: 218 GFIYTRSEYPYAIKVMEKAIEIARREGILGSSVLGSGRAFDMEVRMGAGAYVCGEETSLL 277
            +IY R EY    + ++ AI+ A   G+LG +  GSG  FD+ +  GAGAY+CGEET+L+
Sbjct: 121 SYIYIRGEYIREREALQAAIDEAYEAGLLGKNAAGSGWDFDLYLTHGAGAYICGEETALI 180

Query: 278 NSLEGKRGTVRAKPPLPALQGLFGKPTVVNNVISLASIPVIMDRGAAFYRDFGVGRSHGT 337
            SLEGK+G  R KPP PA  GL+G PT VNNV S+A +P I+ RGA ++  FG   + GT
Sbjct: 181 ESLEGKKGMPRMKPPFPAGAGLYGCPTTVNNVESIAVVPTILRRGADWFAQFGRPNNAGT 240

Query: 338 IPIQLAGNIRYGGLYETAFGLTLGQLVNDIGGGTITG-RPVKAVQVGG-PLGAYFPVSLF 395
               ++G++    + E A  ++  +L++   GG   G   +KAV  GG  +      ++ 
Sbjct: 241 KLFAISGHVNQPCVVEEAMSISFEELIDKHCGGIRGGWDNLKAVIPGGSSVPCVRGENMR 300

Query: 396 DTIFDYEAFTA-AGGLIGHAGIVVFDDTADMLHQARFALEFCAVESCGKCTPCRIGSTRG 454
           D I D++      G  +G A ++V D + D++        F   ESCG+CTPCR G+   
Sbjct: 301 DAIMDFDYLRGELGSGLGTAAVIVMDQSTDIIKAIWRLSAFYKHESCGQCTPCREGTGWM 360

Query: 455 VETVDKIALGIEREKNTALLEDLCETMKFGSLCALGGFTPYPVMSALRHF 504
           +  +D++  G    +   +L D+ + ++  ++CALG    +P+   +R+F
Sbjct: 361 MRVMDRLVRGEAEVEEIDMLFDVTKQVEGHTICALGDAAAWPIQGLIRNF 410