Pairwise Alignments

Query, 340 a.a., oligopeptide ABC transporter ATPase from Agrobacterium fabrum C58

Subject, 571 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

 Score =  250 bits (638), Expect = 7e-71
 Identities = 127/237 (53%), Positives = 170/237 (71%), Gaps = 10/237 (4%)

Query: 41  RQFVQAVNDIDFAVPAGGCLSIVGESGCGKSTVARLVTGLFRPSAGAFQFA--------S 92
           R++VQA N++ FAV  G    +VGESG GKST+AR++ GL++P+AG   F         S
Sbjct: 323 REYVQASNNVSFAVHEGETFGLVGESGSGKSTIARVIAGLYQPNAGRVTFEGIDLTALKS 382

Query: 93  GGNGKPL--SAQMIFQDPYASLNPRWRVKNIIAEPIRELKLRATKAEAMERVEELLQTVG 150
               +PL    QM+FQ+PY S+NPR ++ +IIAEPIR  KL  +++E  + V +LL+ VG
Sbjct: 383 EHERRPLRRQMQMVFQNPYTSMNPRMKIFDIIAEPIRFHKLTRSESETRQIVNDLLEHVG 442

Query: 151 LSASDGEKFPHEFSGGQRQRISIARALASEPEFLVCDEPTSALDVSVQAQVLNLMRRLQD 210
           L    G K+PHEFSGGQRQRISIARALA+ P  L+CDEPTSALDVSVQAQ+LNL++ LQD
Sbjct: 443 LGKMAGLKYPHEFSGGQRQRISIARALATRPRLLICDEPTSALDVSVQAQILNLLKDLQD 502

Query: 211 ELGLTYLFISHDMSVVRHMSDRIAVMYLGRIVEEGDTEELFANPRHPYTRLLLQTIP 267
           EL LT LFISHD+ V+R M DR+ VM +G ++E   TE+LF +P+H Y++ L+  +P
Sbjct: 503 ELNLTMLFISHDLPVIRQMCDRVGVMQMGTLLEVAPTEQLFTDPQHEYSKKLISLMP 559



 Score =  171 bits (434), Expect = 3e-47
 Identities = 96/238 (40%), Positives = 140/238 (58%), Gaps = 17/238 (7%)

Query: 46  AVNDIDFAVPAGGCLSIVGESGCGKSTVARLVTGLFRPS---AGAFQFASGGNGKPLSAQ 102
           AV  +   +  G  + +VGESG GKSTV   V  L  P    AG   + +G     LS Q
Sbjct: 22  AVKSLTLDIQRGEIVGVVGESGAGKSTVGNAVIDLLSPPGTIAGGEVYLNGEKISGLSPQ 81

Query: 103 -----------MIFQDPYASLNPRWRVKNIIAEPIRELKLRATKAEAMERVEELLQTVGL 151
                       IFQDP  SLNP + V++ + E I    ++ +  EA +R   L++ VG+
Sbjct: 82  AMREVRGSKIGFIFQDPMTSLNPLFTVEHQLTETIHA-NMQVSAEEAYQRALSLMKQVGI 140

Query: 152 SASDG--EKFPHEFSGGQRQRISIARALASEPEFLVCDEPTSALDVSVQAQVLNLMRRLQ 209
              +   +++PH+FSGG RQR+ IA ALA EP+ ++ DEPT+ALDVS+Q Q+LNL+R L 
Sbjct: 141 PQPENRLKQYPHQFSGGMRQRVVIAIALAGEPDLIIADEPTTALDVSIQDQILNLIRELC 200

Query: 210 DELGLTYLFISHDMSVVRHMSDRIAVMYLGRIVEEGDTEELFANPRHPYTRLLLQTIP 267
            +  +  + ++HDM VV +++DR+AVMY G +VE G T ++   P HPYTR L+  +P
Sbjct: 201 KKNNVGCMLVTHDMGVVSNVTDRVAVMYRGDLVEFGPTAKVLGTPEHPYTRSLISAVP 258