Pairwise Alignments

Query, 324 a.a., oligopeptide ABC transporter ATPase from Agrobacterium fabrum C58

Subject, 571 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

 Score =  301 bits (770), Expect = 3e-86
 Identities = 146/265 (55%), Positives = 194/265 (73%)

Query: 4   SVIDVRNLKVEFPGRRGTVTALSDISLSIRPGEILGVVGESGAGKSMTGLAIQGLLEKPG 63
           S+++V+NL++E+P R G   A+  ++L I+ GEI+GVVGESGAGKS  G A+  LL  PG
Sbjct: 2   SLLEVKNLRIEYPSRHGVHAAVKSLTLDIQRGEIVGVVGESGAGKSTVGNAVIDLLSPPG 61

Query: 64  RIADGEIWLGSRRIDQLDDRAMESIRGREIGAIFQDPLTSLNPLFTVGAQLVETIRQHLP 123
            IA GE++L   +I  L  +AM  +RG +IG IFQDP+TSLNPLFTV  QL ETI  ++ 
Sbjct: 62  TIAGGEVYLNGEKISGLSPQAMREVRGSKIGFIFQDPMTSLNPLFTVEHQLTETIHANMQ 121

Query: 124 LSKADARARAIQLLRDVGIPSPADRIDHYPHQFSGGMRQRVVIALALSASPKLIIADEPT 183
           +S  +A  RA+ L++ VGIP P +R+  YPHQFSGGMRQRVVIA+AL+  P LIIADEPT
Sbjct: 122 VSAEEAYQRALSLMKQVGIPQPENRLKQYPHQFSGGMRQRVVIAIALAGEPDLIIADEPT 181

Query: 184 TALDVSIQAQIISLLRRLCKEKQTAVMLVTHDMGVIAEAADRVAVLYAGRLIEVGPVEQV 243
           TALDVSIQ QI++L+R LCK+     MLVTHDMGV++   DRVAV+Y G L+E GP  +V
Sbjct: 182 TALDVSIQDQILNLIRELCKKNNVGCMLVTHDMGVVSNVTDRVAVMYRGDLVEFGPTAKV 241

Query: 244 LHEPRHPYTQGLMASIPSLGARVER 268
           L  P HPYT+ L++++P    +++R
Sbjct: 242 LGTPEHPYTRSLISAVPRSDRKLDR 266



 Score =  168 bits (426), Expect = 3e-46
 Identities = 99/248 (39%), Positives = 150/248 (60%), Gaps = 9/248 (3%)

Query: 15  FPGRRGTVTALSDISLSIRPGEILGVVGESGAGKSMTGLAIQGLLE-KPGRIADGEIWLG 73
           F  RR  V A +++S ++  GE  G+VGESG+GKS     I GL +   GR+    I L 
Sbjct: 319 FESRREYVQASNNVSFAVHEGETFGLVGESGSGKSTIARVIAGLYQPNAGRVTFEGIDLT 378

Query: 74  SRRIDQLDDRAMESIRGREIGAIFQDPLTSLNPLFTVGAQLVETIRQH-LPLSKADARAR 132
           + + +  + R +     R++  +FQ+P TS+NP   +   + E IR H L  S+++ R  
Sbjct: 379 ALKSEH-ERRPLR----RQMQMVFQNPYTSMNPRMKIFDIIAEPIRFHKLTRSESETRQI 433

Query: 133 AIQLLRDVGIPSPADRIDHYPHQFSGGMRQRVVIALALSASPKLIIADEPTTALDVSIQA 192
              LL  VG+   A     YPH+FSGG RQR+ IA AL+  P+L+I DEPT+ALDVS+QA
Sbjct: 434 VNDLLEHVGLGKMAGL--KYPHEFSGGQRQRISIARALATRPRLLICDEPTSALDVSVQA 491

Query: 193 QIISLLRRLCKEKQTAVMLVTHDMGVIAEAADRVAVLYAGRLIEVGPVEQVLHEPRHPYT 252
           QI++LL+ L  E    ++ ++HD+ VI +  DRV V+  G L+EV P EQ+  +P+H Y+
Sbjct: 492 QILNLLKDLQDELNLTMLFISHDLPVIRQMCDRVGVMQMGTLLEVAPTEQLFTDPQHEYS 551

Query: 253 QGLMASIP 260
           + L++ +P
Sbjct: 552 KKLISLMP 559