Pairwise Alignments

Query, 397 a.a., cytosine deaminase from Agrobacterium fabrum C58

Subject, 437 a.a., deaminase from Sinorhizobium meliloti 1021

 Score =  143 bits (361), Expect = 8e-39
 Identities = 124/417 (29%), Positives = 189/417 (45%), Gaps = 33/417 (7%)

Query: 4   LLLRNVRPMAGEAC-----DIMI-RNGKITGFG-KFDAEPGLPVEDGKGAIAVPGLIDAH 56
           LLLR  R +AGEA      DI++  +G+I   G + +  P +   D +GA+  PG +D H
Sbjct: 22  LLLRGCR-IAGEAAAADERDILVGEDGRIASIGHRLEVGPDVIGVDLRGALVSPGFVDVH 80

Query: 57  THLDKTTWGMPWHVNNRAAILRERIDFERENRVQIGIDPHRQSMRHAIGLAANGGTHIRS 116
            HLDKT   + +  N    +   R  F R  R     D  R++ R      A G T IRS
Sbjct: 81  QHLDKTGV-LKFTPNPSGTLQGAREAFARYARQAPEDDVTRRAARTMERCLARGTTAIRS 139

Query: 117 HVDIDPTHGLKLVEGIWETREKLDGIIDIEVVAF----PQSGVMVMPGTVELLDEALKQG 172
           H+++D   G   +  +   R +    + +++VAF    P   +  +   +   D A++Q 
Sbjct: 140 HINVDKDAGFNGINALARLRSEWADRLTLQLVAFMTPHPNQDIEWLEKNI---DAAVEQA 196

Query: 173 CEVLGGIDPCGIDRDPKGQLDILFQLATKHGVPIDIHLHEAADLGAFTMELIFERIRANG 232
            + +GG     +  DP   LDILF  A +HG PID+HL E         + +FER+R  G
Sbjct: 197 -DAVGGTP--AVAEDPMRYLDILFAAAERHGRPIDLHLDEHLSPERPLFDAVFERVRRFG 253

Query: 233 MQGNVAISHAFALGMNDYLRVGRLIDEIARLDVAILTTGA-------------PSASVPS 279
           +QG   + HA  L         R+ D++  LD+A++T  A             P   +  
Sbjct: 254 LQGRTVLGHASVLSALPRKEFERIRDQMIDLDIAVVTLPAANLYLQGRSHDMLPPRGLTR 313

Query: 280 IMRLKEAGVRVGGGCDGIRDTWGPWGQPDMLDRAKIIGMKNGLRSDVELAHVLHVVSRGG 339
           +  L  AGV +    D I+D + P G  DML+ A+   +   LR D ELA    +++   
Sbjct: 314 VAELIRAGVAIATASDNIQDPFVPTGSGDMLEIARWTLLAGHLRGD-ELATAYDMITAIP 372

Query: 340 ADVMGIEDYGMEIGCAADFTLLTGETLAHAVVDITPRPLVVKGGRVTARNGKAIVEA 396
           A +M + DYG+  G  AD  +   E ++  V        V+  GR  A      VEA
Sbjct: 373 ARMMNLTDYGIREGTWADLVVTDCEDVSALVGGGPDCIQVLAKGRPVAAPASPAVEA 429