Pairwise Alignments

Query, 315 a.a., oligopeptide ABC transporter permease from Agrobacterium fabrum C58

Subject, 312 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

 Score =  304 bits (778), Expect = 2e-87
 Identities = 153/301 (50%), Positives = 200/301 (66%)

Query: 14  SLFSHMRDSDLYWSFSRSKSAKISALVLAILILAAIFAPWIAPQNPYDGASLDMWKAELP 73
           S +   + SD  + F R K A  S  V  + ++ AI AP IAP NPYD +S+D+  AELP
Sbjct: 9   SRWERFKQSDFLYYFLRDKVAMSSFAVFVLFVIVAISAPLIAPTNPYDLSSIDIMDAELP 68

Query: 74  PIWQEGGEWPFLLGTDTQGRDMLSAILYGTRISIVIGVASVVLSLVIGMTAGLVAGYFGG 133
           P W EGG   FLLGTD QGRD+ S ILYG+R+S+ IG  +V L L +G+  GL AGYFGG
Sbjct: 69  PSWMEGGNEHFLLGTDEQGRDIFSTILYGSRLSLTIGFLAVGLQLTLGIVIGLSAGYFGG 128

Query: 134 FADGLLMRIGDITLSIPTILVAILVSTVVRQMLPDSLREVGASAVLILAIALSAWVQYAR 193
             D  LMR  DI LS  T++VAI+VS + +           A  +L++ I ++ W QYAR
Sbjct: 129 RIDSFLMRFADIQLSFSTMMVAIIVSAIFKASFGGEFFSQYAVVMLVVIIGVAEWPQYAR 188

Query: 194 TVRAQAIVETGKDYVQAAKLIGVPARRIMAAHILPNTLTPIMVAATLNFGMAILTEATLS 253
           TVRA  + E  K+YV+AA+++G  A RIM  HILPN L+PI+V +T+    AI++EA LS
Sbjct: 189 TVRASVLAEKKKEYVEAARVMGFKAPRIMFRHILPNCLSPILVISTVQVANAIMSEAALS 248

Query: 254 FLGIGMPPSQPSLGTLIRIGNQFLFSGSWWIVLFPVFQLCLLVVTVNLLGDWLRDALNPK 313
           FLG+G+P  QPSLG+LI IG  ++FSG+WWI  FP   L LLV+ +NLLGDWLRD  NPK
Sbjct: 249 FLGLGLPVDQPSLGSLISIGFTYIFSGAWWITAFPGIVLVLLVLVINLLGDWLRDVFNPK 308

Query: 314 L 314
           +
Sbjct: 309 I 309