Pairwise Alignments

Query, 322 a.a., oligopeptide ABC transporter permease from Agrobacterium fabrum C58

Subject, 306 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  197 bits (501), Expect = 3e-55
 Identities = 107/319 (33%), Positives = 183/319 (57%), Gaps = 17/319 (5%)

Query: 1   MLVFIIKRLGNAVLVMLSVALIAFLIFRLAGDPVELMVGEQTSQEDRAALRERLGLNDSL 60
           ML FI++RL   VLV+  V    F++ RL GDPV LM+    ++  RAA  +++GL+  +
Sbjct: 1   MLEFILRRLFQGVLVVFGVTATVFVVTRLVGDPVALMLPLSATEAQRAAFAQQIGLDQPI 60

Query: 61  PTQYLRFVKDAAQGNFGVSYRNGQQVLPLIAERFPATLELVLVATVISLVVGLPLGVLTA 120
            TQ+LRFV D A  +FG S    +  + ++ ER P TL L+      ++++ +PLG ++A
Sbjct: 61  ATQFLRFVGDIATLDFGNSLWQRRPAIEVVFERLPNTLLLIAAGLGAAVMLSIPLGAVSA 120

Query: 121 IRRGKWYTEGLQFLSIVGVSLPSFVVGILLILVFSVSLGWAPAFGRGDVVQLGWWSTGLL 180
           +R G         + ++G+++P F +G++ I++F+V+L W P  G G             
Sbjct: 121 LRPGGLVDRLTMSVGLLGLAMPQFWLGLVAIMIFAVTLRWLPTSGMGTA----------- 169

Query: 181 TSSGRAALILPAIALSLYQITLVMRLVRAEMLEVLRSDFVKFARARGIPRWRIYFRHALR 240
                A L+LPA+ L+L  +     +VRA M++ L   +VK ARA+G+   RI   H LR
Sbjct: 170 -----AHLVLPALTLALTPLARFTMMVRASMIDELNKPYVKTARAKGLGLTRILRVHTLR 224

Query: 241 NCLMPVVTLTTMN-VGSLIAFALITETVFQWPGMGMLFIQAVTFLDIPVMAAYLCIISFI 299
           N L+P ++++    + +L  + ++ ETVF WPG+G+  +QA+   D+ +M A + +I+F+
Sbjct: 225 NILVPFLSISGWELIATLSGYTVVVETVFAWPGLGLTAVQAIQRGDLFLMQAIVFVIAFL 284

Query: 300 FVVLNTFVDIAYAVIDPRL 318
            V++   +DI    +DPR+
Sbjct: 285 IVLIGIALDILSKAVDPRM 303