Pairwise Alignments

Query, 322 a.a., oligopeptide ABC transporter permease from Agrobacterium fabrum C58

Subject, 311 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  194 bits (494), Expect = 2e-54
 Identities = 109/323 (33%), Positives = 181/323 (56%), Gaps = 18/323 (5%)

Query: 1   MLVFIIKRLGNAVLVMLSVALIAFLIFRLAGDPVELMV---GEQTSQEDRAA-LRERLGL 56
           ML F ++R+   +  ++ VAL+ F+IF +        +   G + +     A L E  GL
Sbjct: 1   MLRFTLRRVLQIIPTVVVVALLIFVIFSVVPGTFAASLFADGRRAADPQMIARLNEEFGL 60

Query: 57  NDSLPTQYLRFVKDAAQGNFGVSYRNGQQVLPLIAERFPATLELVLVATVISLVVGLPLG 116
           N  L  +++ +V D AQ + G S+R  Q V+ LI +R  A+L+L + A + +LV+ +PLG
Sbjct: 61  NKPLMERFVTYVTDLAQFDLGTSFRTRQPVIDLINDRMWASLQLAIAAMIFALVISVPLG 120

Query: 117 VLTAIRRGKWYTEGLQFLSIVGVSLPSFVVGILLILVFSVSLGWAPAFGRGDVVQLGWWS 176
            + A+R G          ++ G+S+P F +G+L++ +F++ L W P+FG GD        
Sbjct: 121 FVAALRPGSVLDTVTMIGAVSGLSMPQFWLGLLMMYLFALQLNWLPSFGYGD-------- 172

Query: 177 TGLLTSSGRAALILPAIALSLYQITLVMRLVRAEMLEVLRSDFVKFARARGIPRWRIYFR 236
                      LILPA+ L +  + L+ R  RA +L+VL +DF++ A ++G+   ++   
Sbjct: 173 ------GSFRNLILPAVTLGVTPLALLARTTRAGVLDVLNADFIRTAHSKGMSEAKVVRW 226

Query: 237 HALRNCLMPVVTLTTMNVGSLIAFALITETVFQWPGMGMLFIQAVTFLDIPVMAAYLCII 296
           H  RN L+ +VT   +  GSLI  A++ E +F WPG+G L + +V   DIPV+   + +I
Sbjct: 227 HVARNALVLIVTTVGLQFGSLIGQAVVIEKLFAWPGIGSLLVDSVASRDIPVVQGTILVI 286

Query: 297 SFIFVVLNTFVDIAYAVIDPRLR 319
              F+V+NT VD+ YA IDPR++
Sbjct: 287 VLWFLVINTAVDLIYAAIDPRIK 309