Pairwise Alignments

Query, 234 a.a., amino acid ABC transporter permease from Agrobacterium fabrum C58

Subject, 227 a.a., Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine (NCBI) from Rhodospirillum rubrum S1H

 Score =  121 bits (304), Expect = 1e-32
 Identities = 66/192 (34%), Positives = 104/192 (54%)

Query: 10  LAQYQNELLSGIWLTIKLSVLSIVLGCAFGILLASLRSINGGIVRIIVDGYVEVIRNTPF 69
           L  Y   +L G  +T+        LG  FG  LA LR +    +R +V  Y+EVIR TPF
Sbjct: 8   LVHYGPSILRGFGVTVLCWSAGCALGIVFGFALALLRRLPFAPLRWVVRAYIEVIRGTPF 67

Query: 70  LVQLFIVYFGLPGLGFRVGADTAALIGMTINLAAYSTEIIRAGIEAVHKSQIEAGEALGF 129
           L+QLF++Y G P +G R+ A TA ++G+ I  +AY  EI R G EAV K  +EAGE+L  
Sbjct: 68  LIQLFLLYSGGPFIGLRLEATTAGILGLGIYGSAYFAEIFRGGFEAVPKGYVEAGESLSM 127

Query: 130 TKYQIYRHVIIVPAIAKVYPSLCSQFVLMMLASSICSAISTHELAAAAAFVESQTYRSFE 189
           +   I R +++   +  + P++ +  +++   + + S I+  EL      + ++T+  FE
Sbjct: 128 SPLVILRRIVVPTMLVAILPAIVNMMIILTKETVVLSIITVPELMYEMQTMAAETFAVFE 187

Query: 190 VYIVVTLIYLAL 201
           V   + L Y  L
Sbjct: 188 VIFGLALFYWLL 199