Pairwise Alignments

Query, 328 a.a., LacI family transcriptional regulator from Agrobacterium fabrum C58

Subject, 335 a.a., DNA-binding transcriptional regulator CytR from Vibrio cholerae E7946 ATCC 55056

 Score =  116 bits (291), Expect = 7e-31
 Identities = 89/321 (27%), Positives = 154/321 (47%), Gaps = 9/321 (2%)

Query: 2   TVSRVLADPALVSEDTRQKVMKAIEKLGYVPDRIAGSLSSRRTNFITAILPTLTNSNFAD 61
           TVSR L +P  VS  TR++V +A+ + GY P+ +A +L    +  I AI+P + +  F++
Sbjct: 17  TVSRALMNPEKVSSSTRKRVEEAVLEAGYSPNSLARNLRRNESKTIVAIVPDICDPYFSE 76

Query: 62  SAQGLANALRAADYQLLIGYTMYDLLEEERVIRTMMERRPDAIVVAGTVHTKMASEVLMR 121
             +G+ +A     Y +L+G +      E   +  +  ++ D +++ GT      S+   +
Sbjct: 77  IIRGIEDAAMEHGYLVLLGDSGQQKRRENSFVNLVFTKQADGMLLLGTDLPFDVSKPEQK 136

Query: 122 AGIPIVEIWDVPEHPIDHAVGFSNYEVGRTAAKHLISLGFTKIGALGSRADGDVKDWRGE 181
              P+V   +         V   N      A  +L  LG  +I  +       +  +R +
Sbjct: 137 NLPPMVMACEFAPELELPTVHIDNLTSAFEAVNYLTQLGHKRIAQISGPQHAALCQFRHQ 196

Query: 182 SRLLGFSAALREAGISDDLIIREGSAPVSYDHGAKTLGSLLAKAPDVEAIFAVSDISAVG 241
               G+  ALR AGI+ +          +++ GAK +  LLA      AIF  +D  A+G
Sbjct: 197 ----GYQQALRRAGITMNPTYCT-FGDFTFEAGAKAVRQLLALPEQPTAIFCHNDTMAIG 251

Query: 242 ALMECHRRGIHVPDRISILGFGDFDIGRQCYPAISTIRVDAQMIGRKAGELLLSILEPEK 301
           A+ E  R G+ VP  +S++GF D    + C P ++TI      IGR+A   +L +LE  +
Sbjct: 252 AIQEAKRLGLRVPQDLSVVGFDDIQFAQYCDPPLTTISQPRYEIGRQA---MLMMLELLR 308

Query: 302 DAVVPEGARVDVGFELIVRET 322
              V  G+R+ +  +L+VRE+
Sbjct: 309 GHDVRAGSRL-LETKLVVRES 328