Pairwise Alignments

Query, 413 a.a., D-amino acid dehydrogenase small subunit from Agrobacterium fabrum C58

Subject, 421 a.a., D-amino acid dehydrogenase small subunit from Vibrio cholerae E7946 ATCC 55056

 Score =  156 bits (395), Expect = 1e-42
 Identities = 125/407 (30%), Positives = 193/407 (47%), Gaps = 13/407 (3%)

Query: 5   DVIVIGAGVVGLSAAIAAQGRGLSVTVIDREGPAAG-ASAGNAGAFAFTDILPLASPGIL 63
           +V+V+G+GVVGL++A      G  VTV+DR+   A   S  NAG  ++    P A+PGI 
Sbjct: 3   EVLVLGSGVVGLTSAWYLAQAGHDVTVVDRQPRGAEETSFANAGQISYGYSSPWAAPGIP 62

Query: 64  WKAPKWLLDPLGPLSVPPAYALKIAPWMFRFWRACAASKVEHSTAAQTAMMDLSRAELEP 123
            KA KW+L+   PL + P+    +  WM +    C  S+ + + +   A+ + SR  L+ 
Sbjct: 63  QKALKWMLEKHAPLKIQPSLDPALLSWMGKMLLNCQLSRYQVNKSRMLAIANYSRECLKA 122

Query: 124 FLRKTDTIAMLRKEGNLQVYESEAEFESSLAGWKARERHGIEFRHLNTEQMSEIQPGIAP 183
             +        R+ G LQV+  E +  +     +   + G+ F  LN  Q    +PG+AP
Sbjct: 123 LNQTYSLDYQGRQRGTLQVFRDEKQLTAIEKDMQLLAQSGVRFELLNVAQCLTHEPGLAP 182

Query: 184 ---RFTCGTFTPGWFSIADPKFYTLALADHFRTIGGRIECLDVASLRPLEDGVEV--VSH 238
              +   G + P      D   +   L +  +  G R    D    + + +G ++  V  
Sbjct: 183 VQEKLVGGLWLPD-DETGDCYLFCQQLTELAKQQGVRFH-FDCHIQQLVCEGKKIIGVQT 240

Query: 239 DGRTRKAGKVVLAAGAFSHRIARSLGEKIPLETERGYNTTLPA--GAFDLRTQVTFGGHG 296
           D    KA   V+A G++S  + + LG +IP+   +GY+ TLP     F  ++ V    + 
Sbjct: 241 DLGLLKADAYVVALGSYSTSLLKPLGIEIPVYPVKGYSLTLPIIDEKFAPQSTVMDETYK 300

Query: 297 FVVTRLSSGIRVGGAVELGGLELPANFARSEALLAKAKAFLP-GLKTEGGKQWMGFRPSL 355
             +TR S  IRV G  EL G +     AR   +   A+   P G     G+ W GFRP  
Sbjct: 301 VALTRFSDRIRVAGTAELAGFDPAIPEARKATIEMVARDLFPHGGDFAKGQFWTGFRPMT 360

Query: 356 PDSLPAIGQARHTARVVYAFGHGHLGLTQSAGTARIVADLLT-GQKP 401
           PD  P IG   +T  +    GHG LG T + G+A I+AD+LT G+ P
Sbjct: 361 PDGTPIIGATPYT-NLYTNTGHGTLGWTMACGSASILADVLTHGESP 406