Pairwise Alignments

Query, 217 a.a., amino acid ABC transporter permease from Agrobacterium fabrum C58

Subject, 219 a.a., amino acid ABC transporter permease from Methanococcus maripaludis S2

 Score = 98.2 bits (243), Expect = 1e-25
 Identities = 61/196 (31%), Positives = 99/196 (50%), Gaps = 5/196 (2%)

Query: 6   LTWSDLAFLAKGAGMTLAVTAVAVTAGTIMGIIFGIIR-FQFGPYWSLPLTFVLDIFRSV 64
           + + ++ F+     +TL +T ++     I+ ++ G  R   F     L L   +++FR  
Sbjct: 5   IVFDNIPFIIDAVFVTLKITIMSFLLAVIIAVLVGSTRAMNFSKTLDLVLMAYVEVFRGT 64

Query: 65  PLLIQLVLGNAFQSIAKLGWPPFTTSCVVL--SLYTAAYCTEIVRGGIGAVPSNTRRACR 122
           PLLIQL     +  +  +G    +T   VL  SL   AY +EI+R  I +VP     A  
Sbjct: 65  PLLIQLFF--IYYGLPSIGITMSSTFAAVLGLSLNGGAYISEIIRAAIQSVPVGQFEAAE 122

Query: 123 SLGMTWSQDMRYIVLPLATRVSLPSWIGLTLGVMKDSALVLWLGLIELLRASQILVTRLQ 182
           SLGM   + M YIVLP A R+++P  +     ++K+S+L+  L + EL R  Q++ TR  
Sbjct: 123 SLGMGKIESMVYIVLPQAFRITIPPLVNSFSSILKESSLISVLAITELTRIGQLIYTRTS 182

Query: 183 EPLTILMICGAIYFLI 198
            P  I +  G IY ++
Sbjct: 183 RPFEIYLTIGLIYLIL 198