Pairwise Alignments

Query, 555 a.a., oligopeptide ABC transporter ATPase from Agrobacterium fabrum C58

Subject, 539 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

 Score =  526 bits (1354), Expect = e-153
 Identities = 264/532 (49%), Positives = 381/532 (71%), Gaps = 2/532 (0%)

Query: 23  NAIIDARNIAVTFKVEHGTVEAVKDISFQLYRGETIAIVGESGSGKSVTARTIMGLLTKR 82
           N ++  RN++V+F    G V+AVK++SF +  GET+AIVGESGSGKSV+   +M LL K 
Sbjct: 4   NPLLQVRNLSVSFTTNDGVVDAVKNVSFDIRPGETLAIVGESGSGKSVSTNALMQLLPKN 63

Query: 83  ASVSKSATVRFNGDDILRFSSRQRRALRGNRISMIFQEPMSSLNPIYTIGSQIVEAIRVH 142
           A +   +++ F G+++L  +  Q R +RG+RI MIFQEPM+SLNP   +G Q+ EAIR H
Sbjct: 64  ARIHPESSIMFEGEELLNKTDTQMRRIRGDRIGMIFQEPMTSLNPYMRVGVQVAEAIRCH 123

Query: 143 SRLSRKEAEARALDLLRQVQIPEPEARLKQYPHQLSGGQRQRVMIAMALSNDPDVLIADE 202
             +S+ +A+ R L+L + V +P+P+   +++PH+ SGGQ QR+MIAMAL N+PD+LIADE
Sbjct: 124 RNVSQNQAKQRVLELFQLVHLPDPKGAYQKFPHEFSGGQLQRIMIAMALINEPDILIADE 183

Query: 203 PTTALDVTVQAQILNLIRDLQKKRGMAVVLITHDLTIVKQFSDYVYVMQHGEMREHNTTE 262
           PTTALDVTVQA++L LI+++Q   GMA++ ITHDL +VK  +D V VM  G++ E  +TE
Sbjct: 184 PTTALDVTVQAEVLRLIKEIQANMGMAILFITHDLGVVKFVADRVLVMCKGDVVEQGSTE 243

Query: 263 RLFAAPQHPYTKRLLASEPRGTAKPLPENSGVLLTASGVRVSFMMRYGGLFKPELKELIA 322
           +LF  P+H YT+ L+ S P+G+  P+  ++  LL A  +RV F+++   + +   +   A
Sbjct: 244 QLFLQPEHDYTRMLINSIPKGSKDPVAVDAAPLLKAEDIRVKFLVKPYFISRRN-QYFEA 302

Query: 323 VDSLGLTLKRHETLGLVGESGSGKTTFGQSLLRLNEPVGGEVIFDGERVDGRSRSEMRPL 382
           V  + L LK+ ETLG+VGESGSGK+T G++L+ L  P  G++ F G+     S  +   L
Sbjct: 303 VKGISLELKQGETLGIVGESGSGKSTLGRALIGL-LPSTGQIAFKGQDFRALSEKQRLAL 361

Query: 383 RSRMQIVFQDPFASLNPRMTIGQIIEEGLIINGLGRTKAERLERVRDALEAAGMPGNILS 442
           +  +Q+VFQDP+ SL+PRMT+G+II EGL+++    +K ER++R R ALE   +  N ++
Sbjct: 362 KKDIQMVFQDPYGSLSPRMTVGEIITEGLLVHQPHISKLERMQRARRALEEVRLDPNSIN 421

Query: 443 RFPHEFSGGQRQRIAIARAVALEPEFILLDEPTSALDLSVQAQIIDLLRKLQDERGLSYL 502
           R+PHEFSGGQRQRIAIARA+ LEP FILLDEPTSALD SVQ  +I+LL+++Q  R + YL
Sbjct: 422 RYPHEFSGGQRQRIAIARALILEPSFILLDEPTSALDRSVQLTVIELLKEIQKRRNIGYL 481

Query: 503 FISHDLKVVRALCHRVIVMQGGRIVEEGPVEDVLTNPKTEYTQRLVRAAFEI 554
           FISHDL VV+AL  RV+VMQ G+++E+G  E +  NP+ EYT++L+ A+F+I
Sbjct: 482 FISHDLAVVKALSDRVLVMQKGQVMEQGSAESIFHNPQHEYTKKLIAASFDI 533