Pairwise Alignments

Query, 555 a.a., oligopeptide ABC transporter ATPase from Agrobacterium fabrum C58

Subject, 542 a.a., peptide ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021

 Score =  396 bits (1018), Expect = e-114
 Identities = 224/511 (43%), Positives = 321/511 (62%), Gaps = 13/511 (2%)

Query: 43  EAVKDISFQLYRGETIAIVGESGSGKSVTARTIMGLLTKRASVSKSATVRFNGDDILRFS 102
           + VK +SF L  GE   IVGESGSGK++  R ++ LL     V+   +V + G D+L+  
Sbjct: 22  QVVKSVSFDLAPGEIFGIVGESGSGKTLATRALISLLPPTIKVA-DGSVSYKGRDVLKMK 80

Query: 103 SRQRRALRGNRISMIFQEPMSSLNPIYTIGSQIVEAIRVHSRLSRKEAEARALDLLRQVQ 162
             + R LRG  I ++FQEPM+SLNP  TIG Q+ E + +H++ S +E  +  LD+L++V 
Sbjct: 81  ENELRHLRGAEIGVVFQEPMTSLNPSMTIGRQLEEGLILHTKASAQERRSLILDMLKRVG 140

Query: 163 IPEPEARLKQYPHQLSGGQRQRVMIAMALSNDPDVLIADEPTTALDVTVQAQILNLIRDL 222
           I +PE  L  YPH+ SGG RQR+M+A  +   P +LIADEPTTALD  +Q  ++ L+ +L
Sbjct: 141 IRDPEGALSSYPHEFSGGMRQRIMLASVMLLKPALLIADEPTTALDAVIQRDVMELMVEL 200

Query: 223 QKKRGMAVVLITHDLTIVKQFSDYVYVMQHGEMREHNTTERLFAAPQHPYTKRLLASEP- 281
            +  G A++LI+HDL +V +++  + VM+ G + E   TE L  APQHPYTK+LL+S P 
Sbjct: 201 TRAEGTAILLISHDLPMVARYTSRIVVMEKGAIVEKGRTEDLLKAPQHPYTKKLLSSLPF 260

Query: 282 RGTAKPLPENSGVLLTASGVRVSFMMRYGGLFKPELKELIAVDSLGLTLKRHETLGLVGE 341
           RG  + +   S  +++A  + V +  R   LF+   K   A+  + + +   E + LVG 
Sbjct: 261 RGRPRQIDLTSVPMISARDIIVDYAGR-KSLFRKN-KPKRALHGVSIDIHEGEVVALVGG 318

Query: 342 SGSGKTTFGQSLLRLNEPVGGEVIFDGERVDGRSRSE-MRPLRSRMQIVFQDPFASLNPR 400
           SGSGKTT G+++  L     G + F      GR R+E     R   Q+VFQDP++SL+PR
Sbjct: 319 SGSGKTTLGRTIAGLVTESEGRIQF-----QGRPRTENWTDYRLNCQMVFQDPYSSLDPR 373

Query: 401 MTIGQIIEEGL-IINGLGRTKAERLERVRDALEAAGMPGNILSRFPHEFSGGQRQRIAIA 459
           MTI  ++EE L  + GL   KA+R +R  + LE  G+  +   R+PHE SGGQRQR+AIA
Sbjct: 374 MTIEALVEEALRPVPGLD-GKAKR-KRTLETLEEVGLGVDYAGRYPHELSGGQRQRVAIA 431

Query: 460 RAVALEPEFILLDEPTSALDLSVQAQIIDLLRKLQDERGLSYLFISHDLKVVRALCHRVI 519
           RA+A  P F++ DEP SALD++V+AQ++DL   LQ   G S LFISHDL VV  +  RV+
Sbjct: 432 RAIARRPRFLIADEPVSALDVTVRAQVLDLFSDLQKRYGFSCLFISHDLGVVEQVADRVV 491

Query: 520 VMQGGRIVEEGPVEDVLTNPKTEYTQRLVRA 550
           VMQ GRI+EEG  + +  +PK  YT+RL+ A
Sbjct: 492 VMQDGRIIEEGDRDTIFDSPKEAYTRRLLSA 522



 Score =  171 bits (433), Expect = 7e-47
 Identities = 106/253 (41%), Positives = 150/253 (59%), Gaps = 15/253 (5%)

Query: 44  AVKDISFQLYRGETIAIVGESGSGKSVTARTIMGLLTKRASVSKSATVRFNGDDILRFSS 103
           A+  +S  ++ GE +A+VG SGSGK+   RTI GL+T+         ++F G    R  +
Sbjct: 299 ALHGVSIDIHEGEVVALVGGSGSGKTTLGRTIAGLVTE-----SEGRIQFQG----RPRT 349

Query: 104 RQRRALRGNRISMIFQEPMSSLNPIYTIGSQIVEAIRVHSRLSRKEAEARALDLLRQVQI 163
                 R N   M+FQ+P SSL+P  TI + + EA+R    L  K    R L+ L +V +
Sbjct: 350 ENWTDYRLN-CQMVFQDPYSSLDPRMTIEALVEEALRPVPGLDGKAKRKRTLETLEEVGL 408

Query: 164 PEPEARLKQYPHQLSGGQRQRVMIAMALSNDPDVLIADEPTTALDVTVQAQILNLIRDLQ 223
               A   +YPH+LSGGQRQRV IA A++  P  LIADEP +ALDVTV+AQ+L+L  DLQ
Sbjct: 409 GVDYAG--RYPHELSGGQRQRVAIARAIARRPRFLIADEPVSALDVTVRAQVLDLFSDLQ 466

Query: 224 KKRGMAVVLITHDLTIVKQFSDYVYVMQHGEMREHNTTERLFAAPQHPYTKRLLASEPRG 283
           K+ G + + I+HDL +V+Q +D V VMQ G + E    + +F +P+  YT+RLL++ P  
Sbjct: 467 KRYGFSCLFISHDLGVVEQVADRVVVMQDGRIIEEGDRDTIFDSPKEAYTRRLLSAIP-- 524

Query: 284 TAKPLPENSGVLL 296
            A    E  GV L
Sbjct: 525 -ALDQNEKGGVTL 536