Pairwise Alignments

Query, 555 a.a., oligopeptide ABC transporter ATPase from Agrobacterium fabrum C58

Subject, 546 a.a., oligopeptide ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021

 Score =  447 bits (1149), Expect = e-130
 Identities = 238/530 (44%), Positives = 334/530 (63%), Gaps = 6/530 (1%)

Query: 25  IIDARNIAVTFKVEHGTVEAVKDISFQLYRGETIAIVGESGSGKSVTARTIMGLLTKRAS 84
           +++ +++ V F    G   A   +SF +  GET+ I+GESGSGKSV+A  IMGL+     
Sbjct: 6   LLEVKDLTVDFLSLGGAFRATSGVSFHVDAGETLVILGESGSGKSVSASAIMGLIDTPPG 65

Query: 85  VSKSATVRFNGDDILRFSSRQRRALRGNRISMIFQEPMSSLNPIYTIGSQIVEAIRVHSR 144
              + +V + G D+   S  +RR L G RI+MIFQ+P+S LNP+YTIG Q+ E   VH  
Sbjct: 66  DICAGSVAYRGRDLSSLSEGERRDLNGRRIAMIFQDPLSHLNPVYTIGWQLEEVFTVHGV 125

Query: 145 LSRKEAEARALDLLRQVQIPEPEARLKQYPHQLSGGQRQRVMIAMALSNDPDVLIADEPT 204
            S  EA  RA+++L +V IPEPE R+ QYPHQ SGGQRQR+MI MA++  P++LIADEPT
Sbjct: 126 ASGAEARQRAIEILGRVGIPEPEKRIDQYPHQFSGGQRQRIMIGMAIALRPEILIADEPT 185

Query: 205 TALDVTVQAQILNLIRDLQKKRGMAVVLITHDLTIVKQFSDYVYVMQHGEMREHNTTERL 264
           TALDV+VQAQIL L++ LQ + G+A+++ITHDL +    +D V VM+ G + E      +
Sbjct: 186 TALDVSVQAQILELLKKLQAEDGLAIIMITHDLEVAANMADRVIVMKSGRIVEEGEARAV 245

Query: 265 FAAPQHPYTKRLLASEP----RGTAKPLPENSGVLLTASGVRVSFMMRYGGLFKPELKEL 320
           F  P H YT+ L+ + P    R   +P       +L    +   + +  G   KP    L
Sbjct: 246 FENPAHSYTRTLINALPHADDRAPPRPARPAGKPILEVKNIDKFYTLSSGFFAKP--ARL 303

Query: 321 IAVDSLGLTLKRHETLGLVGESGSGKTTFGQSLLRLNEPVGGEVIFDGERVDGRSRSEMR 380
            AV +L   +   ET+G+VGESGSGK+T  + LL LNE  GGE +F G  V    R ++ 
Sbjct: 304 HAVKNLSFDVAAGETIGIVGESGSGKSTVARVLLGLNEASGGEALFHGRDVLKMDRKQLL 363

Query: 381 PLRSRMQIVFQDPFASLNPRMTIGQIIEEGLIINGLGRTKAERLERVRDALEAAGMPGNI 440
             R ++Q+VFQDP++S+NPRMT+  I+ E   I+     K    +RV + L   G+    
Sbjct: 364 AFRRKVQMVFQDPYSSMNPRMTVFDIVSEPWRIHKDILEKTRWRDRVTELLGLVGLNPEH 423

Query: 441 LSRFPHEFSGGQRQRIAIARAVALEPEFILLDEPTSALDLSVQAQIIDLLRKLQDERGLS 500
             R+PH+FSGGQRQRIAIARA+A +PE ++ DE  SALD+SVQ Q+IDLL +L+D  GL+
Sbjct: 424 AKRYPHQFSGGQRQRIAIARALACDPELVVCDEAVSALDVSVQVQVIDLLAELRDRLGLA 483

Query: 501 YLFISHDLKVVRALCHRVIVMQGGRIVEEGPVEDVLTNPKTEYTQRLVRA 550
           Y+FI+HDL +VR    R+IVM+ G IVE    E++  NP+  YT++L+ A
Sbjct: 484 YIFITHDLPIVRHFADRIIVMKSGEIVEHATTEEIFRNPQHAYTRQLINA 533



 Score =  200 bits (509), Expect = 1e-55
 Identities = 109/265 (41%), Positives = 166/265 (62%), Gaps = 15/265 (5%)

Query: 25  IIDARNIAVTFKVEHG------TVEAVKDISFQLYRGETIAIVGESGSGKSVTARTIMGL 78
           I++ +NI   + +  G       + AVK++SF +  GETI IVGESGSGKS  AR ++GL
Sbjct: 280 ILEVKNIDKFYTLSSGFFAKPARLHAVKNLSFDVAAGETIGIVGESGSGKSTVARVLLGL 339

Query: 79  LTKRASVSKSATVRFNGDDILRFSSRQRRALRGNRISMIFQEPMSSLNPIYTIGSQIVEA 138
                + +      F+G D+L+   +Q  A R  ++ M+FQ+P SS+NP  T+   + E 
Sbjct: 340 -----NEASGGEALFHGRDVLKMDRKQLLAFR-RKVQMVFQDPYSSMNPRMTVFDIVSEP 393

Query: 139 IRVHSRLSRKEA-EARALDLLRQVQIPEPEARLKQYPHQLSGGQRQRVMIAMALSNDPDV 197
            R+H  +  K     R  +LL  V +    A  K+YPHQ SGGQRQR+ IA AL+ DP++
Sbjct: 394 WRIHKDILEKTRWRDRVTELLGLVGLNPEHA--KRYPHQFSGGQRQRIAIARALACDPEL 451

Query: 198 LIADEPTTALDVTVQAQILNLIRDLQKKRGMAVVLITHDLTIVKQFSDYVYVMQHGEMRE 257
           ++ DE  +ALDV+VQ Q+++L+ +L+ + G+A + ITHDL IV+ F+D + VM+ GE+ E
Sbjct: 452 VVCDEAVSALDVSVQVQVIDLLAELRDRLGLAYIFITHDLPIVRHFADRIIVMKSGEIVE 511

Query: 258 HNTTERLFAAPQHPYTKRLLASEPR 282
           H TTE +F  PQH YT++L+ + P+
Sbjct: 512 HATTEEIFRNPQHAYTRQLINATPK 536