Pairwise Alignments

Query, 378 a.a., oligopeptide ABC transporter permease from Agrobacterium fabrum C58

Subject, 341 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

 Score =  133 bits (335), Expect = 6e-36
 Identities = 97/349 (27%), Positives = 159/349 (45%), Gaps = 50/349 (14%)

Query: 31  VWRRLRRSVTGMLGLVLVALLILIAIFADFFAPMNPLETNASFSPPQVVRFTDKDGNFSP 90
           +W+ LR +   M+G+ ++ L  L+A+ A       P                 + GN   
Sbjct: 4   LWKLLRGNRMAMIGVTILGLFFLLAVAAPLLTSHEP---------------DKRTGNPHE 48

Query: 91  FPRVYATADTAELDPVTFQPIVGPDYDNPVYLGFFVKGSEYRLLGLIPMSRHFFGSTDGK 150
           +P     A  A  D    + +                 ++ R L +             K
Sbjct: 49  YPAFVVKAAKANPDGWIAENLA----------------TDRRTLAM-----------SKK 81

Query: 151 PVHFLGTDKFGRDVLSRAIYGSRISLAIALSVVAIVTVIGTSVGLISGYFGGPLDAWLQR 210
             H LGT + GRDV S+  YG+R+SLA+       V  + T +G+ +GYFGG +D +L  
Sbjct: 82  ADHILGTTRMGRDVWSQVAYGARVSLAVGFGAGITVCFLATVIGVSAGYFGGKIDDFLTA 141

Query: 211 FVEVVLAFPQLPLYLALTSLIPVTAPTTVFLLFVVGVMSALGWAQMSREVRGKTLALARI 270
            + ++L  PQ PL   L + I    P T+ L     ++    WA  +R VR +T+AL   
Sbjct: 142 AMNIMLVIPQYPLLFVLAAFIGEAGPLTIAL-----IIGCTSWAWGARVVRSQTMALREK 196

Query: 271 DYVRAAIAVGATDRRIIFQHILPNVMSHVIVAVTLHIPSVVLLESFLGFLGFAVKPPLIS 330
           ++V+AA  +G +  RIIF  ILPN++S V  +    +   +++E+ + FLG    P  IS
Sbjct: 197 EFVKAAEVLGESSWRIIFIEILPNLISIVGASFIGSVMYAIMMEATISFLGLG-DPNTIS 255

Query: 331 WGLMLQDTATYS--VIGSYPWILAPVGFVLVTVFAFNALGDGLRDAVDP 377
           WG+ML +  T S  +IG++  +LAP   + + V     L   + +  +P
Sbjct: 256 WGIMLYNVQTSSSMLIGAWWELLAPCLSLTLLVTGLALLNFAVDEIANP 304