Pairwise Alignments

Query, 378 a.a., oligopeptide ABC transporter permease from Agrobacterium fabrum C58

Subject, 375 a.a., ABC transporter for D-Raffinose, permease component 1 (from data) from Sinorhizobium meliloti 1021

 Score =  566 bits (1458), Expect = e-166
 Identities = 280/355 (78%), Positives = 311/355 (87%)

Query: 24  NESYLALVWRRLRRSVTGMLGLVLVALLILIAIFADFFAPMNPLETNASFSPPQVVRFTD 83
           +ESY ALVWRRL+RS TG+LGLVLV LLIL+A+FA+F +P++P  T+ +F+ PQ + F D
Sbjct: 21  HESYSALVWRRLKRSWTGLLGLVLVCLLILMAVFAEFLSPVDPKATDVAFAQPQTISFRD 80

Query: 84  KDGNFSPFPRVYATADTAELDPVTFQPIVGPDYDNPVYLGFFVKGSEYRLLGLIPMSRHF 143
           K+GNF   PR Y   +T ELDPVTFQPI+GPDYDNP  LGFFVKG+ YRL GLIP  RH 
Sbjct: 81  KEGNFVFPPRSYPVRETEELDPVTFQPIIGPDYDNPQVLGFFVKGAPYRLFGLIPAERHL 140

Query: 144 FGSTDGKPVHFLGTDKFGRDVLSRAIYGSRISLAIALSVVAIVTVIGTSVGLISGYFGGP 203
           FG+ DG PVH LGTDKFGRDVLSR +YGSRISL IAL+VV IVTV+GT+VG++SGYFGG 
Sbjct: 141 FGAVDGTPVHLLGTDKFGRDVLSRILYGSRISLMIALTVVFIVTVVGTTVGMVSGYFGGR 200

Query: 204 LDAWLQRFVEVVLAFPQLPLYLALTSLIPVTAPTTVFLLFVVGVMSALGWAQMSREVRGK 263
            DAW+QRFVE+VLAFPQLPLYLAL SLIPVTAPT VFL FV+ VMSALGWAQMSREVRGK
Sbjct: 201 FDAWVQRFVELVLAFPQLPLYLALASLIPVTAPTNVFLAFVIIVMSALGWAQMSREVRGK 260

Query: 264 TLALARIDYVRAAIAVGATDRRIIFQHILPNVMSHVIVAVTLHIPSVVLLESFLGFLGFA 323
           TLALARI+YVRAAIA+GATDRRIIFQHI PNVMSHVIVAVTL IP VVLLESFLGFLGFA
Sbjct: 261 TLALARIEYVRAAIAIGATDRRIIFQHIFPNVMSHVIVAVTLAIPHVVLLESFLGFLGFA 320

Query: 324 VKPPLISWGLMLQDTATYSVIGSYPWILAPVGFVLVTVFAFNALGDGLRDAVDPY 378
           VKPPLISWGLMLQDTA YS IGSYPWIL+PV FVLVTVFAFNALGDGLRDA+DPY
Sbjct: 321 VKPPLISWGLMLQDTANYSAIGSYPWILSPVAFVLVTVFAFNALGDGLRDAIDPY 375