Pairwise Alignments

Query, 378 a.a., oligopeptide ABC transporter permease from Agrobacterium fabrum C58

Subject, 284 a.a., binding-protein-dependent transport systems inner membrane component (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  163 bits (413), Expect = 5e-45
 Identities = 92/226 (40%), Positives = 138/226 (61%), Gaps = 9/226 (3%)

Query: 153 HFLGTDKFGRDVLSRAIYGSRISLAIALSVVAIVTVIGTSVGLISGYFGGPLDAWLQRFV 212
           H LGTD  GRDVLSR ++G+R+SL +    V I   IG ++GL +GYFGG  D  + R V
Sbjct: 63  HPLGTDALGRDVLSRMLHGARVSLWVGFVSVGISVAIGLALGLAAGYFGGLADELIMRCV 122

Query: 213 EVVLAFPQLPLYLALTSLIPVTAPTTVFLLFVVGVMSALGWAQMSREVRGKTLALARIDY 272
           +++L FP   L LA+ + +    P+ + ++ V+G+ S   W  ++R VR +TL+L   D+
Sbjct: 123 DIMLCFPSFFLILAVIAFLE---PSLLNIMAVIGLTS---WMGVARLVRAETLSLRERDF 176

Query: 273 VRAAIAVGATDRRIIFQHILPNVMSHVIVAVTLHIPSVVLLESFLGFLGFAVKPPLISWG 332
           + AA   GA   RI+  H+LPN ++ V+V+ TL +   +L ES L FLG  V+PP+ SWG
Sbjct: 177 IAAARLAGAGPVRILCLHVLPNAVAPVLVSATLGVAGAILTESALSFLGLGVQPPMPSWG 236

Query: 333 LMLQDTATYSVIGSYPWI-LAPVGFVLVTVFAFNALGDGLRDAVDP 377
            ML +     V+   PW+ + P   +L+TV  +N LG+ LRD +DP
Sbjct: 237 NMLLEGK--DVLEIAPWLSVFPGCAILLTVLGYNLLGESLRDLLDP 280