Pairwise Alignments

Query, 335 a.a., oligopeptide ABC transporter permease from Agrobacterium fabrum C58

Subject, 326 a.a., putative peptide ABC transporter, permease protein from Phaeobacter inhibens DSM 17395

 Score =  164 bits (414), Expect = 4e-45
 Identities = 100/333 (30%), Positives = 181/333 (54%), Gaps = 17/333 (5%)

Query: 1   MLRFLTIRVASAIPVLLILSVVTFAIIQAPPGDYADYIRSQLMNQGGASFEQAEAQAQAY 60
           ML ++  R+  ++ VL ++ +V F++ +        ++   + N  G   E+        
Sbjct: 1   MLAYIIRRIMQSVLVLFVVGLVAFSMFR--------FVGDPIENMLGQ--ERTTEDVVRL 50

Query: 61  RIEHGLDKPLVIQYFNWIGGIITRGDFGYSFYYNKPVADVVGERLPRTIALALVCHIFAS 120
           R + GLD+P  +QY+ ++     +G+FG S+   +PVAD++ ER P T+ LALV    A 
Sbjct: 51  RADLGLDQPFPVQYWRFLENA-AQGNFGLSYRQGRPVADILIERAPATLELALVSGTLAM 109

Query: 121 VLGIAFGIWAATRQYSWVDNLLSTIAFLGMTIPRFLMALILVYLMVFHFDVSEIGSFFSP 180
           VLGI  G+  A R+  W+ N + T + +G+++P FL+ ++L+Y  VF  ++  + SF   
Sbjct: 110 VLGIGLGVLTAIRRDGWLANTIMTASLIGVSLPTFLIGILLIY--VFSVELGWLPSFGRG 167

Query: 181 QYGG-APWSWGKFVD--LVSHVWPVVAIAVFGGLAYNMRVMRGNLLDTLNAQYVETARAK 237
           +      WS G      L+S V P + + ++  +   MR++R  +L+ L   Y+  ARA+
Sbjct: 168 ETVMLGQWSTGFLTKSGLMSLVLPSITLGLYQ-MTLIMRLVRSEMLEVLRTDYIRFARAR 226

Query: 238 GLSEGAVIMRHAVPNAVHPLVMYQGVVLPYMLSGEIETAIIFALPTVGPAIVGSMAVGDV 297
           GL E AV  RHA+ N + P++   G+ L  +++  I T  +F  P VG   + ++   D+
Sbjct: 227 GLGERAVYFRHALVNTMVPVITIIGLQLGSIIAFAIITETVFQWPGVGLLFINAVQFVDI 286

Query: 298 YVTATFMMVLAATLIVGNIIADMLLAMLDPRVR 330
            V A ++M+++   +  N+I D+L  ++DPR+R
Sbjct: 287 PVMAAYLMLISVLFVGINLIVDLLYFLIDPRLR 319