Pairwise Alignments

Query, 335 a.a., oligopeptide ABC transporter permease from Agrobacterium fabrum C58

Subject, 342 a.a., putative peptide permease protein from Phaeobacter inhibens DSM 17395

 Score =  209 bits (531), Expect = 1e-58
 Identities = 112/338 (33%), Positives = 195/338 (57%), Gaps = 12/338 (3%)

Query: 1   MLRFLTIRVASAIPVLLILSVVTFAIIQAPPGDYADYIRSQLMNQGGASFEQAEAQAQAY 60
           +LR+   R  + +  LL++SV+ F II  PPGDY     ++L   G +S  +   +A+  
Sbjct: 3   ILRYAIYRFGTMLLTLLVVSVLVFIIINLPPGDYLSNQIAELRASGQSSGVE---KAEFL 59

Query: 61  RIEHGLDKPLVIQYFNWIGGI--------ITRGDFGYSFYYNKPVADVVGERLPRTIALA 112
           R E+ LD+PL  QY  W+G +        + +G+FG+SF +++PVA++VGE L  T+ + 
Sbjct: 60  RKEYALDRPLWQQYMIWMGFMPGPHGFSGMIQGNFGWSFEFDRPVAEIVGESLWLTVLVN 119

Query: 113 LVCHIFASVLGIAFGIWAATRQYSWVDNLLSTIAFLGMTIPRFLMALILVYLMVFHFDVS 172
           +   +F  ++ +  G+ AA R  +WVD   + + +LG+  P FL+ALIL Y    +FD+ 
Sbjct: 120 VAAVLFVYLVALPLGVLAAARSRTWVDYTSAFVGYLGLATPNFLLALILFYYGHKYFDLP 179

Query: 173 EIGSFFSPQYGGAPWSWGKFVDLVSHVWPVVAIAVFGGLAYNMRVMRGNLLDTLNAQYVE 232
            IG    P + G P +W K   ++ H+     +    G +  M+ +R N+LD L   YVE
Sbjct: 180 -IGGLMDPAFEGEPMTWAKVKSILIHLIVPTFVIGTSGASAMMQRLRANMLDELGKPYVE 238

Query: 233 TARAKGLSEGAVIMRHAVPNAVHPLVMYQGVVLPYMLSGEIETAIIFALPTVGPAIVGSM 292
           TA AKG++   ++ ++ +  A +P V   G +LP M+SG +  +++  L T+GP ++ ++
Sbjct: 239 TAIAKGMAPARMLTKYPLRVAFNPFVADIGNLLPAMISGSVLVSVVLGLQTIGPTLLTAL 298

Query: 293 AVGDVYVTATFMMVLAATLIVGNIIADMLLAMLDPRVR 330
              D++++   +M +A   ++G +I+D+LL MLDPR+R
Sbjct: 299 KTQDMFLSGFVLMFVALLTLIGTMISDVLLVMLDPRIR 336