Pairwise Alignments

Query, 695 a.a., alpha-galactoside ABC transporter substrate-binding protein from Agrobacterium fabrum C58

Subject, 541 a.a., Dipeptide-binding ABC transporter, periplasmic substrate-binding component (TC 3.A.1.5.2) from Pseudomonas fluorescens FW300-N1B4

 Score = 67.8 bits (164), Expect = 1e-15
 Identities = 102/435 (23%), Positives = 163/435 (37%), Gaps = 99/435 (22%)

Query: 145 LFQVDAKDTEPLPNLAKSWEWSEDGHTLTMHLVKGAK------WSDGEAFNADDVMF--- 195
           L Q +   T  +P LA  W+ S+DG T T HL +G K      +     FNADDV+F   
Sbjct: 61  LTQFERGGTAVIPGLATKWDISDDGLTYTFHLREGVKFHTTPYFKPTREFNADDVLFTFN 120

Query: 196 ------------------YWEDAVVDPNVSPLGGGASPEAFGEGTTLKKIDDYTVEWTFK 237
                             Y+ D  +D N+               T + K+DD+TV++T K
Sbjct: 121 RMINKDDPFRKAYPTEFPYFTDMGMDTNI---------------TKIDKVDDHTVKFTLK 165

Query: 238 ---AAFPKQYLYTMAYPSFCPGPSHILKPQHPKYSKNTYNQFKNAFPPEYMNMPV-MGAW 293
              AAF +    + A              Q  +Y+     + K A   +    PV  G +
Sbjct: 166 EVDAAFIQNMAMSFA------------SVQSAEYAAQLLKEGKAA---DINQKPVGTGPF 210

Query: 294 VPVSYRPDDLIVLRRNPYYWKVDEKGQQLPYLNEVHYKLSTWADRDVQAVAGSGDFSNLE 353
           V  SY+ D  I    N  YWK D+       ++ + + ++T     +Q +  +     L 
Sbjct: 211 VFKSYQKDSNIRYTGNKDYWKPDD-----VKIDNLIFAITTDPSVRIQKLKKNECQITLF 265

Query: 354 QPENFVASLKRAADPNAPARLAFGPRLIGYNLQMNFSANGWGNPDERGQAIRELNRNEVF 413
                + +LK       P +  F    I YN+      +   NP      + +L      
Sbjct: 266 PRPADLKALKEDKTLKVPDQAGFNLGYIAYNVMDKIKGSDQPNP------MAQLK----V 315

Query: 414 RQAVTSALDRKAIGDSLVKG----PFTAIYPGGISSGTSFYDRASTVYYPFNLEGAKAAL 469
           RQA+  A++++ I DS+ +G       A+ P   S  T+  D       P+N E AK  L
Sbjct: 316 RQALDMAVNKQQIIDSVYQGAGQLAVNAMPPTQWSYDTTIKDA------PYNPEKAKELL 369

Query: 470 ASIGLKDTDGDGFLNFPKETLGGRNVEITLLVNNGYATDKSLAEGLVGQMAKLGLRVVIH 529
              G+K+         P +     N              K +AE L    AK+G++  I 
Sbjct: 370 KEAGIKEGTEINLWAMPVQRPYNPNA-------------KLMAEMLQSDWAKIGIKAKIV 416

Query: 530 SLDSNQRDAAHYGGQ 544
           + +  +      GG+
Sbjct: 417 TYEWGEYIKRSKGGE 431