Pairwise Alignments

Query, 695 a.a., alpha-galactoside ABC transporter substrate-binding protein from Agrobacterium fabrum C58

Subject, 518 a.a., nickel/dipeptide/oligopeptide ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

 Score = 59.7 bits (143), Expect = 3e-13
 Identities = 88/396 (22%), Positives = 150/396 (37%), Gaps = 70/396 (17%)

Query: 157 PNLAKSWEWSEDGHTLTMHLVKGAKWSDGEAFNADDVMFYWEDAVVDPNVSPLGGGASPE 216
           P LA+SW+   D  T+   L KG K+  G  F ADDV++ +       +   +       
Sbjct: 69  PRLAESWQ-RVDNETMRFTLRKGVKFHSGNDFTADDVVWTFNRLKESADFKGI------- 120

Query: 217 AFGEGTTLKKIDDYTVEWTFKAAFPK-QYLYTMAYP---SFCPGPSHILKPQHPKYSKNT 272
            F    +L K+DDYT+E      +P  + + T  +P    F  G +   K      +K  
Sbjct: 121 -FEPLVSLTKVDDYTIEIKTAGTYPLIENVATYIFPMDSKFYTGTTADGK------NKAE 173

Query: 273 YNQFKNAFPPEYMNMPVMGAWVPVSYRPDDLIVLRRNPYYWKVDEKGQQLPYLNEVHYKL 332
             +  N+F  E  N+   G +   +      +  +RNP YW    KG        V   +
Sbjct: 174 IVKHGNSFASE--NISGTGPFTVTAREQGVKLEFQRNPNYWDKASKGNVDKLTLAV---I 228

Query: 333 STWADRDVQAVAGSGDFSNLEQPENFVASLKRAADPNAPARLAF-GPRLIGYNLQMNFSA 391
              A R    ++G  D      P ++    +R  D          G R+I + +  N   
Sbjct: 229 KEDATRVAALLSGGVDMIAPVSPNDY----QRIKDAKGVDLFTMPGTRVITFQMNQN--- 281

Query: 392 NGWGNPDERGQAIRELNRNEVFRQAVTSALDRKAIGDSLVKGPFTAIYPGGISSGTSFYD 451
               NP     A++++      RQA+  A++ + I D ++KG  T        S   +  
Sbjct: 282 ---SNP-----ALKDVR----VRQAIVYAINNEGIVDKVMKGAATT---AAQQSPVGYAG 326

Query: 452 RASTVYYPFNLEGAKAALASIGLKDTDGDGFLNFPKETLGGRNVEITLLV-NNGYATDKS 510
               +   F+L  AK  +   G +                 +   +T++  NN Y  D+ 
Sbjct: 327 YNENLKPRFDLNKAKELMKEAGYE-----------------KGFNLTMIAPNNRYVNDEK 369

Query: 511 LAEGLVGQMAKLGLRVVIHSLDSNQRDAAHYGGQFD 546
           +A+     ++K+G++V     D      A Y  +FD
Sbjct: 370 IAQAASAMLSKIGIKV-----DLKTMPKAQYWPEFD 400