Pairwise Alignments

Query, 303 a.a., hypothetical protein from Agrobacterium fabrum C58

Subject, 320 a.a., Protein of unknown function DUF6, transmembrane (NCBI) from Rhodospirillum rubrum S1H

 Score =  107 bits (266), Expect = 5e-28
 Identities = 80/278 (28%), Positives = 125/278 (44%), Gaps = 9/278 (3%)

Query: 14  RETDTRAGVGWLLLDMTLVSGGMTALVKAQGVTYPAFQLVFIRAMVGLIFILPLIWRHRG 73
           R    R GV   L+  T++      + K     YP   +V +R     +F + L+ R  G
Sbjct: 31  RAPQLRLGVA-CLVGATVIFAFQDGITKYLASHYPIPFIVMVRYWAFALFAIALVARKPG 89

Query: 74  EM---VRVKYPWRNLFRICCNAIALTSNFIAITLLPLATVNAVGFSRPLVTMAMAVAFLG 130
            +    R K P     R       +    +A   + LA V ++    PL+ MAMA+  LG
Sbjct: 90  GVRAATRSKRPILQSLRALLLVSEIGLVALAFRHMGLAEVQSIFAVYPLLVMAMAIVLLG 149

Query: 131 ETVSRFRWVGASLAFVGVLVVIGPDGAEFGVGVLVVLVSVVFGALAVIQTRALRQENTTV 190
           E V   RWV   + F+G+L+++ P    F    L  L S    AL  + TR +  +++  
Sbjct: 150 ERVGWRRWVATGVGFIGLLIIVRPGVGTFEPAALYSLASATMYALYTVLTRMVSADDSAG 209

Query: 191 MMVFYT--VGLAVITAI-PAIWTWKPVASFDWVALLGIGLLAQMGQYCFLRAYRIADASV 247
               YT  VG  ++T    A WT      + W+ALL   L      +  ++A   A ASV
Sbjct: 210 TTFLYTGVVGAILVTLFGGAHWTAMSGIDWGWMALL--ALFGMSSHFLLIKALEYAPASV 267

Query: 248 LAPVGYLSILFVTAVGYFLFDEVPENRVVLGIAIILVS 285
           L P  YLS+++   VGY +F+ +P+    +G A+I+ S
Sbjct: 268 LQPYNYLSLVWSGIVGYLVFNNIPDLATFIGGAVIVAS 305