Pairwise Alignments

Query, 280 a.a., sugar ABC transporter permease from Agrobacterium fabrum C58

Subject, 287 a.a., sugar uptake ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  138 bits (347), Expect = 2e-37
 Identities = 69/207 (33%), Positives = 121/207 (58%), Gaps = 4/207 (1%)

Query: 77  FNSTLVAVLVTVSNCFFDSLVGYTLAKFEFRGRYFIFLAILSTLMIPTEMLVIPWYLMSS 136
           FNS +V++   V       L GY  +++ F  +  +F+ I++TLMIP + ++ P +++ +
Sbjct: 81  FNSLIVSIGTVVLTVAVSVLAGYGFSRYRFPFKNALFVLIIATLMIPFQSILTPLFIILA 140

Query: 137 QLGWLDSYWGIM--FPGMMTAFGTFLMKQFFETVPNDFLEAARVDGLNEFQIWWKVALPL 194
           + G  +S  G+M  +  +   F  F+M+  F+ VP +  EAAR+DG  + ++  +V LPL
Sbjct: 141 RFGLNNSLVGLMLVYVTLQLPFSVFMMRNAFDAVPKEIEEAARIDGARDLKLLVRVLLPL 200

Query: 195 VTPALSALAIFTFLGNWTAFFWPLIVTTSKELYTLPVGLSSFAVEQ--QIQWEMIMTGAA 252
           V P ++ ++IF FL  W  FF  L++ +S + YTLPV +++    +   I W  +  G A
Sbjct: 201 VMPGIATVSIFAFLNAWNEFFAALVLLSSNDNYTLPVLMTAVRAGRLGAINWGAVQAGVA 260

Query: 253 IATIPTLIVFIVLQRYIVRGVMLAGLK 279
           +  +P L VF++LQRY +RG+M   +K
Sbjct: 261 VMVVPCLFVFLLLQRYYMRGLMAGAVK 287



 Score = 25.8 bits (55), Expect = 0.001
 Identities = 14/36 (38%), Positives = 20/36 (55%), Gaps = 2/36 (5%)

Query: 5   LPLSHARIRPGRIVA--WTLLFIGGLIMVSPLLFMF 38
           LP+    +R GR+ A  W  +  G  +MV P LF+F
Sbjct: 235 LPVLMTAVRAGRLGAINWGAVQAGVAVMVVPCLFVF 270