Pairwise Alignments

Query, 280 a.a., sugar ABC transporter permease from Agrobacterium fabrum C58

Subject, 280 a.a., carbohydrate ABC transporter permease from Rahnella sp. WP5

 Score =  140 bits (352), Expect = 4e-38
 Identities = 71/232 (30%), Positives = 122/232 (52%), Gaps = 2/232 (0%)

Query: 51  LRLIPAAPTIANYMTVMADGRFLRWFFNSTLVAVLVTVSNCFFDSLVGYTLAKFEFRGRY 110
           +R+ P   T+ ++  V  + +F  +FFNS +V+           +  G+  ++F FRG+ 
Sbjct: 49  VRMWPGEMTLTHFQRVFTESQFPLYFFNSLIVSFGTAFLTTIIAAGAGFAFSRFSFRGKT 108

Query: 111 FIFLAILSTLMIPTEMLVIPWYLMSSQLGWLDSYWGIM--FPGMMTAFGTFLMKQFFETV 168
            +   +L T M P  M++ P Y + + LG  +S  G++  +      F TFLM+ FF+++
Sbjct: 109 VMAALLLFTQMFPLVMILAPIYKVMAPLGLTNSLLGLVLIYTAFNVPFATFLMQSFFDSI 168

Query: 169 PNDFLEAARVDGLNEFQIWWKVALPLVTPALSALAIFTFLGNWTAFFWPLIVTTSKELYT 228
           P D  E+A ++G + F    KV +PL  P ++A   F F   W+   + L++    E+ T
Sbjct: 169 PKDLEESAMLEGCSRFMALRKVIIPLTLPGMAATLGFVFTAAWSELLFSLMLINKNEVMT 228

Query: 229 LPVGLSSFAVEQQIQWEMIMTGAAIATIPTLIVFIVLQRYIVRGVMLAGLKG 280
            PVGL SF  +  + W  +M  A +A IP  + F  +QRY+V+G+    +KG
Sbjct: 229 FPVGLLSFVSKFAVSWGDMMAAAVLALIPACLFFAFIQRYLVQGLTAGAVKG 280