Pairwise Alignments

Query, 280 a.a., sugar ABC transporter permease from Agrobacterium fabrum C58

Subject, 293 a.a., carbohydrate ABC transporter permease from Rahnella sp. WP5

 Score =  153 bits (386), Expect = 5e-42
 Identities = 83/260 (31%), Positives = 137/260 (52%), Gaps = 5/260 (1%)

Query: 22  LLFIGGLIMVSPLLFMFATSFKTADQVYDLRLIPAAPTIANYM-----TVMADGRFLRWF 76
           L+F   +  + P L+M   SFK    +Y   L     +  NY+     T  A+  FLR  
Sbjct: 32  LMFALAITWLYPYLWMLIGSFKNTADIYTTSLFSGPLSFDNYIFLFDGTGKAEKPFLRTL 91

Query: 77  FNSTLVAVLVTVSNCFFDSLVGYTLAKFEFRGRYFIFLAILSTLMIPTEMLVIPWYLMSS 136
           FNS  +   +TV       L+GY LAK EF+GR      ++  ++ P  M +IP +++  
Sbjct: 92  FNSIFITSTITVCVTLSSCLIGYALAKMEFKGRDIFKNLLILQMVFPAFMFIIPHFVLMR 151

Query: 137 QLGWLDSYWGIMFPGMMTAFGTFLMKQFFETVPNDFLEAARVDGLNEFQIWWKVALPLVT 196
           +LG ++SY  ++ P +M  +G F++ Q F+  PND++ AAR+D     +I   V LPL  
Sbjct: 152 ELGMINSYGALILPFVMNGWGIFMISQSFKGTPNDYIHAARLDHAGLIKILLHVMLPLNK 211

Query: 197 PALSALAIFTFLGNWTAFFWPLIVTTSKELYTLPVGLSSFAVEQQIQWEMIMTGAAIATI 256
             L+ +AIFTF   W  F WPLIV        L V L++F+    I    ++ G+ + T+
Sbjct: 212 SILAIVAIFTFTSAWDNFLWPLIVMQDANKMPLSVLLATFSKSYGIYVGPVLAGSVVQTL 271

Query: 257 PTLIVFIVLQRYIVRGVMLA 276
           P +++FI+ +++ + G+ L+
Sbjct: 272 PIVVLFILFRKHFLEGMSLS 291