Pairwise Alignments

Query, 280 a.a., sugar ABC transporter permease from Agrobacterium fabrum C58

Subject, 271 a.a., carbohydrate ABC transporter permease from Rahnella sp. WP5

 Score =  147 bits (372), Expect = 2e-40
 Identities = 83/265 (31%), Positives = 137/265 (51%), Gaps = 2/265 (0%)

Query: 16  RIVAWTLLFIGGLIMVSPLLFMFATSFKTADQVYDLRLIPAAPTIANYMTVMADGRFLRW 75
           R++    +++  L+   P+L     +   A       L  A  T  N++       F R+
Sbjct: 8   RLILNLAIWLAALLWFLPVLVAVWVAIHPASVQGSFSLF-APLTFQNFINAWQAAPFARY 66

Query: 76  FFNSTLVAVLVTVSNCFFDSLVGYTLAKFEFRGRYFIFLAILSTLMIPTEMLVIPWYLMS 135
           F N+TL+ +++ V      +L  Y L +F+ +G  FIF  IL  LMI  ++L++  Y   
Sbjct: 67  FMNTTLLVMMIVVCQLILATLAAYALVRFKLKGAGFIFALILLQLMISPDVLILNNYKTI 126

Query: 136 SQLGWLDSYWGIMFPGMMTAFGTFLMKQFFETVPNDFLEAARVDGLNEFQIWWKVALPLV 195
             LG  D+  GI  P   +AF  FL++Q F+++P    EAA V+G + F I  K+ +PL 
Sbjct: 127 GALGLRDTLAGIALPYFASAFAIFLLRQTFKSIPLVLEEAAIVEGASRFYILRKIYIPLA 186

Query: 196 TPALSALAIFTFLGNWTAFFWPLIVTTSKELYTLPVGLSSF-AVEQQIQWEMIMTGAAIA 254
            P   A A+ +   +W  F WPL++T S ++  + VGL  F A EQ +QW +I     + 
Sbjct: 187 KPIYVAFALVSISFHWNDFLWPLVITDSVKVRPVTVGLQLFSAPEQGVQWALISAATLMT 246

Query: 255 TIPTLIVFIVLQRYIVRGVMLAGLK 279
            +P L++F++ QR  V+  M AG++
Sbjct: 247 VLPLLVLFLIFQRQFVQSFMRAGIR 271