Pairwise Alignments

Query, 280 a.a., sugar ABC transporter permease from Agrobacterium fabrum C58

Subject, 277 a.a., binding-protein-dependent transport systems inner membrane component (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  157 bits (398), Expect = 2e-43
 Identities = 94/263 (35%), Positives = 139/263 (52%), Gaps = 8/263 (3%)

Query: 19  AWTLLFIGGLIMVSPLLFMFATSFKTADQVYDLRLIPAAP-TIANYMTVMADGRFLRWFF 77
           AWTL  +  L    PLL+   T+F  ++  +  R   AAP T+ N+        F R+  
Sbjct: 21  AWTLAVLWAL----PLLYAVWTAFHPSE--FSTRFTLAAPLTLDNFRAAWDAAPFARYLV 74

Query: 78  NSTLVAVLVTVSNCFFDSLVGYTLAKFEFRGRYFIFLAILSTLMIPTEMLVIPWYLMSSQ 137
           N+ L+  +V        +L  Y  AK++F G+  +F  +L  LMI  ++LV+  Y   S 
Sbjct: 75  NTVLLVTMVLAGQLVLCTLAAYAFAKYDFPGKGILFALVLMQLMIMPDVLVVENYRTMSA 134

Query: 138 LGWLDSYWGIMFPGMMTAFGTFLMKQFFETVPNDFLEAARVDGLNEFQIWWKVALPLVTP 197
           +G LDS   I  P M +AFG FL++Q F+++P +  EAA V+G +  QI WKV +PL  P
Sbjct: 135 IGVLDSTLAIGLPYMASAFGIFLLRQTFKSIPKELDEAAAVEGASTLQILWKVYVPLGKP 194

Query: 198 ALSALAIFTFLGNWTAFFWPLIVTTSKELYTLPVGLSSF-AVEQQIQWEMIMTGAAIATI 256
              A A+ +   +W  F WPLIVT +     L VGL  F + EQ + W +I     + + 
Sbjct: 195 VYLAYALVSVSYHWNNFLWPLIVTNTTNSRPLTVGLQVFSSTEQGVDWSIITAATLMTSG 254

Query: 257 PTLIVFIVLQRYIVRGVMLAGLK 279
           P LI F++ QR  V+  M AG+K
Sbjct: 255 PLLIGFLLFQRQFVQSFMRAGIK 277