Pairwise Alignments

Query, 280 a.a., sugar ABC transporter permease from Agrobacterium fabrum C58

Subject, 275 a.a., binding-protein-dependent transport systems inner membrane component (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  146 bits (368), Expect = 6e-40
 Identities = 78/261 (29%), Positives = 144/261 (55%), Gaps = 5/261 (1%)

Query: 22  LLFIGGLIMVSPLLFMFATSFKTADQVYDLRLIPAAPTIANYMTVMADG-RFLRWFFNST 80
           L+     +M+ P+L++F  +FK+   VY L+L    PT+ N+ TV  D  R     FNST
Sbjct: 17  LIIAAMFVMLVPILWIFLAAFKSHVDVYQLKLF-FTPTLENFGTVFDDPYRLGEKLFNST 75

Query: 81  LVAVLVTVSNCFFDSLVGYTLAKFEFRGRYFIFLAILSTLMIPTEMLVIPWYLMSSQLGW 140
           +VA++  V      +L  Y+ ++F   G   + + IL+T  +P  ++++P+++M   +G 
Sbjct: 76  VVALVTVVIAIPIATLAAYSFSRFRLVGETAMLVVILATQFLPAVVIILPFFIMFRDIGL 135

Query: 141 LDSYWGIMFPGM--MTAFGTFLMKQFFETVPNDFLEAARVDGLNEFQIWWKVALPLVTPA 198
           LD+  G++   +  +  F  +++K F + +P D  EAA VDG +  Q+ W + LP+  P 
Sbjct: 136 LDTRLGLILVNLAIVMPFAIWMIKGFIDGIPLDTEEAAMVDGSSRLQVIWNIVLPMAAPG 195

Query: 199 LSALAIFTFLGNWTAFFWPLIVTTSKELYTLPVGLSSFAVEQQIQWEMIMTGAAIATIPT 258
           L    IF F+  W  F + LI+ T+K+  TLP+GL+ F  E+   W ++     I   P 
Sbjct: 196 LLTSGIFCFIIAWNEFLFALIL-TNKDAVTLPIGLALFKGEEGDLWNLLSAAGIIIMAPM 254

Query: 259 LIVFIVLQRYIVRGVMLAGLK 279
            ++ +++++Y V+G+ +  ++
Sbjct: 255 FVLALMIRKYFVQGMTMGAVR 275