Pairwise Alignments

Query, 280 a.a., sugar ABC transporter permease from Agrobacterium fabrum C58

Subject, 284 a.a., binding-protein-dependent transport systems inner membrane component (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  145 bits (365), Expect = 1e-39
 Identities = 78/259 (30%), Positives = 134/259 (51%), Gaps = 7/259 (2%)

Query: 23  LFIGGLIMVSPLLFMFATSFKTADQVY--DLRLIPAAPTIANYMTVMADG---RFLRWFF 77
           L IG   +  P+   F  S  +  ++    + L+P    + NY   +  G          
Sbjct: 22  LIIGVAFIFFPIWLAFVASTVSQPEIVRPPMPLLPGDQLVENYTRALTAGINAPVALMLG 81

Query: 78  NSTLVAVLVTVSNCFFDSLVGYTLAKFEFRGRYFIFLAILSTLMIPTEMLVIPWYLMSSQ 137
           NS ++A+ + +       L  + +  F F GR   F  I  TLM+P E+ ++P Y + + 
Sbjct: 82  NSLIMALGIALGKIAISLLSAFAIVYFRFPGRMLFFWLIFLTLMLPVEVRIVPTYEVIAN 141

Query: 138 LGWLDSYWGIMFPGMMTAFGTFLMKQFFETVPNDFLEAARVDGLNEFQIWWKVALPLVTP 197
            G L+SY G++ P + +A  TFL +QFF TVP++  EAARVDG    + ++ + LP+   
Sbjct: 142 FGMLNSYQGLILPLVASATATFLFRQFFMTVPDELAEAARVDGARPMRFFFDILLPMSRT 201

Query: 198 ALSALAIFTFLGNWTAFFWPLIVTTSKELYTLPVGLSSF--AVEQQIQWEMIMTGAAIAT 255
            ++AL +  F+  W  + WPL++TT  E+ T+ +G+     + +    W +IM  + +A 
Sbjct: 202 NIAALFVILFIYGWNQYLWPLLITTDPEMNTIVMGIKQMFPSGDDTADWPVIMATSILAM 261

Query: 256 IPTLIVFIVLQRYIVRGVM 274
           +P +IV I +QR  VRG++
Sbjct: 262 VPPVIVVITMQRLFVRGLV 280