Pairwise Alignments

Query, 280 a.a., sugar ABC transporter permease from Agrobacterium fabrum C58

Subject, 295 a.a., carbohydrate ABC transporter permease from Bifidobacterium breve UCC2003

 Score =  196 bits (499), Expect = 4e-55
 Identities = 98/272 (36%), Positives = 164/272 (60%), Gaps = 3/272 (1%)

Query: 11  RIRPGRIVAWTLLFIGGLIMVSPLLFMFATSFKTADQVYDL--RLIPAAPTIANYMTVMA 68
           R   GR +++ +L + G++ + P L+M   S KT  ++     +L+P   T+AN+     
Sbjct: 24  RFIKGRGISYIVLAVIGIVWIFPFLWMALGSLKTQREILAKPPKLMPEHATLANFSQWFT 83

Query: 69  DGRFLRWFFNSTLVAVLVTVSNCFFDSLVGYTLAKFEFRGRYFIFLAILSTLMIPTEMLV 128
              F  +F NS +VAV+  + N  F S+VGY LAK +F G+  +F A++ TLM+P+    
Sbjct: 84  QLNFGSYFTNSLIVAVITVLGNMVFCSMVGYALAKMKFAGKNILFGAVMVTLMVPSVATF 143

Query: 129 IPWYLMSSQLGWLDSYWGIMFPGMMTAFGTFLMKQFFETVPNDFLEAARVDGLNEFQIWW 188
           +P +++ S +   ++Y  ++ P +    G FLM+QF   +P+  +EAARVDG  E +I++
Sbjct: 144 VPLFVIISNMHLANTYAALILPFLCQPIGVFLMRQFIGGIPDALMEAARVDGAGELRIFF 203

Query: 189 KVALPLVTPALSALAIFTFLGNWTAFFWPLIVTTSKELYTLPVGLSSFAVEQQ-IQWEMI 247
           ++ LP   PAL+ L+I TFL +W  F WPL+   S+E+YTLPV LS ++  Q    + ++
Sbjct: 204 QIILPQCGPALATLSILTFLSSWNNFLWPLVSAQSEEMYTLPVALSLYSTGQNATNYSVL 263

Query: 248 MTGAAIATIPTLIVFIVLQRYIVRGVMLAGLK 279
           + GA +   P L++F+ LQRY ++GV + G+K
Sbjct: 264 LAGAVLVITPILLLFVFLQRYFIQGVAMTGIK 295