Pairwise Alignments

Query, 317 a.a., hypothetical protein from Agrobacterium fabrum C58

Subject, 295 a.a., glycine betaine ABC transporter substrate-binding protein from Methanococcus maripaludis S2

 Score =  137 bits (346), Expect = 2e-37
 Identities = 81/271 (29%), Positives = 130/271 (47%), Gaps = 7/271 (2%)

Query: 26  QAADDAACRTIRLSDPGWTDITATNGVASVLLDALGYEADVKTLSVPIGYQAMKNGEIDV 85
           Q+ DD    TI+   P W  +T  + V  V+L+  GY  ++  L   I Y  + +G++DV
Sbjct: 26  QSTDDTEKGTIKFGLPPWPGVTVKSNVVKVILEEQGYNVELNQLDAGITYAKLADGDLDV 85

Query: 86  FLGNWMPAQKSFVDDLNAAKAAEVMTKNLEGAKFTLAVPAYMAEKGVKDFADLAKHADEF 145
            L  W+P               E++  N+      LAVP Y  E G++   DL  + + F
Sbjct: 86  SLAGWLPTTHEEY-WTQYGNQLEMVHVNVGKTALGLAVPTYTYEAGIQSITDLNGNEELF 144

Query: 146 ESKIYGIEPGAPANQNIQKIIDANDFGLKGWQLVESGEQAMLAQVERAGRDKKAVVFLAW 205
           + KI GIEPGA    N +K ID+  + L G++L  S   AM+A++ RA  + + +V   W
Sbjct: 145 DGKIIGIEPGAGIMSNTEKAIDS--YSLSGYELQSSSTPAMMAELARAINEDENIVVTVW 202

Query: 206 APHPMNEKIDIAYLSGGDAYFGPNFGGAEVYTLARTGWPQQCPNAATLFKNLKFDIGMEN 265
            PH +  K DI  L   +  +G    G +VYT+ART +    P     F+  + D  +++
Sbjct: 203 EPHSVFFKFDIKMLDDPEKVYG---DGDKVYTIARTDFKDDYPEVYEFFQKFEVDPSVQS 259

Query: 266 SLMGSILG-GEDSKAAAAAWLKANPKALDGW 295
             +      G D +  A  W+  NP+ ++ W
Sbjct: 260 EWIYKYSDEGMDPEEVAEEWVANNPELVENW 290