Pairwise Alignments

Query, 298 a.a., LysR family transcriptional regulator from Agrobacterium fabrum C58

Subject, 306 a.a., transcriptional regulator GcvA from Vibrio cholerae E7946 ATCC 55056

 Score =  130 bits (327), Expect = 4e-35
 Identities = 95/303 (31%), Positives = 148/303 (48%), Gaps = 15/303 (4%)

Query: 1   MSERPLDLGWMRIFTEVARRGSLTAAAASMRLTQPAVSYQIRRLEEELGVALIRRKHRGI 60
           MS R   L  +++F   AR  S T AA  + +TQ AVS+QI+ LEE LG+ L RR++R +
Sbjct: 1   MSRRLPPLNSLKVFEAAARHLSFTRAAEELFVTQAAVSHQIKALEEFLGLKLFRRRNRSL 60

Query: 61  ELTAEGQRLFEIVSRNVDAIDLLAQQLRRTEERQTIRLHTDYAFSSLWLIPRMHGFRVLN 120
            LT EGQ  F  +     ++     +L    E+  + +    +F+  WL+PR+  F    
Sbjct: 61  LLTEEGQSYFLDIKDIFSSLAEATDKLLERSEKGALTISLPPSFAIQWLVPRLADFNQQE 120

Query: 121 PDINIQIVATQDPLGQGKHDSDVMIIFGTRQEAGDGAVLLLSEKVTPVCSPALLAETPTP 180
           PDI+++I A     G    D DV I +G     G  A  L  E + P+CSPALL      
Sbjct: 121 PDIDVRIKAVDMDEGSLTDDVDVAIYYGRGSWPGLRADKLYQEFLIPLCSPALLLGNKPM 180

Query: 181 TSIADFSRRKLIHLENTSQAHWFDWAAYFKHFGVQRGADH---DGGDISFNNYTMVVQAT 237
             ++D +   L+H  +TS+  W       K F  + G D+   + G I F++ TMV+QA 
Sbjct: 181 EKLSDLAYHTLLH--DTSRKDW-------KQFAKENGLDNVNVNHGPI-FSHSTMVLQAA 230

Query: 238 IGEQGFALGWAGLVDPLLEAGVLVTAGPSLDAPGRGYWLM-RPKNSD-NAVRKLTSWLID 295
              QG ALG   L  P ++AG L+     +      ++++   K +D   +     W++ 
Sbjct: 231 AHGQGVALGNNVLAQPEIDAGRLIAPFDEVLMTNNAFYVVCHEKQADMGRIATFRDWMLK 290

Query: 296 ERR 298
           + R
Sbjct: 291 KAR 293