Pairwise Alignments

Query, 385 a.a., nolF secretion protein from Agrobacterium fabrum C58

Subject, 354 a.a., Secretion protein HlyD (NCBI) from Rhodospirillum rubrum S1H

 Score =  119 bits (298), Expect = 1e-31
 Identities = 91/321 (28%), Positives = 148/321 (46%), Gaps = 17/321 (5%)

Query: 61  EIATIGTRPMAERLSISGELQPVNRVLIRAREAGKILEMNVREGQAVRAGDMLVRFETDE 120
           E+A +    +A+R+   G  +    + +    +G+I+EM    G+ V  GD+LVR +   
Sbjct: 46  EVAAVRRARVADRVEAVGTTRAHQAIAVVPLASGRIVEMPFPPGRKVNKGDVLVRLDD-- 103

Query: 121 LQSTLLLRQSDRDAAEAELMLAMQALARTEQLAAKNIASTEQLDKAKSDVVVKTTRVQSL 180
                  +++D + AEA L    +AL R   L      +   +D  +S+      R+   
Sbjct: 104 -----AAQRADVEEAEATLTQVSRALERARSLRRTQAVAQATVDDLQSNRAAAAARL--- 155

Query: 181 SSQVDIARLALRNAEIRAPFDGTVTRRVAETGARIGADGELLTLVDTSELEAKVLVATRD 240
               D A   L +  I APF G V  R  + GAR+     L TL D S ++ +  V    
Sbjct: 156 ----DRAHKDLADRVIAAPFAGIVGFRELDVGARVSEGERLTTLDDLSSVDVEFAVPEIH 211

Query: 241 IPRVARGQTAELEIDGLAGQIVKGTVERISPVAEDGTRVVAVYLRLANRDGQLWGGMFAG 300
             R+  G   E       G+I  G ++RI     + +R   V   L N  G L  G+F  
Sbjct: 212 FGRLRPGMAIEATSQAFPGRIFTGAIDRIDSRIGEVSRAFRVRATLPNPQGLLPSGLFLN 271

Query: 301 GSILLREKNDALVVPAIALRKDETGYHVLKIQDGHLRRQTVAVGPRWNGGSLIEIGAGLA 360
            SI++ E+  AL+VP  A++ +  G  V  IQ G +RRQ + +G R   G+ +E+  GLA
Sbjct: 272 VSIVIEER-PALMVPEEAIQAEAGGSVVYVIQGGAVRRQPIVLGQR--TGTAVEVRDGLA 328

Query: 361 DGETILTVPLPELRPDMAVTI 381
           +G+ +++  +  LR    VT+
Sbjct: 329 EGDQVVSRGIQRLRDGSPVTV 349