Pairwise Alignments

Query, 1048 a.a., AcrB/AcrD/AcrF family protein from Agrobacterium fabrum C58

Subject, 1036 a.a., AcrB/AcrD/AcrF family protein from Vibrio cholerae E7946 ATCC 55056

 Score =  507 bits (1306), Expect = e-147
 Identities = 319/1029 (31%), Positives = 541/1029 (52%), Gaps = 23/1029 (2%)

Query: 1    MFLTRISVNHPVFATMMMVALLVMGAFSLQRLGLDQYPNVDVPVVVVVTSYPGATPETVE 60
            M+L+ +SV  PV A ++ + L V G  S  +L + + P+++ PVV V T Y GA+   +E
Sbjct: 1    MWLSDVSVKRPVAALVLSMLLCVFGVVSFTKLAVREMPDIESPVVSVSTRYQGASATIIE 60

Query: 61   MEVTRPVEDALNAIGGLDEVTSTSYEGRSVVVAKFKLEVQSSAAAQEVRDKIAAIEANFP 120
             ++T  +ED L  I G+DE+TS S  G S +   F+L    +    ++RD +A  + + P
Sbjct: 61   SQITSVLEDQLAGISGIDEITSVSRNGMSRITVTFELGYDLNTGVSDIRDAVARAQRSLP 120

Query: 121  EDTKKPVISRFDPAAEPILSLAISSTSLDVPALATLAEQKVVRQLTTVAGIGQATLVGGR 180
            E+   P + + + + +  + + +SS+ +D   L    E+ ++ + + ++G+    + GG 
Sbjct: 121  EEADDPQVFKNNGSGQASVYINLSSSEMDRTQLTDYIERVLLDRFSLISGVSSVDVSGGL 180

Query: 181  KRQIDVTIDETRMRALGIGVNEVVTALRAGNSNSPAGSVVDPVSERTIQIQSRIEEPEAL 240
             + + V I    M   G+  +++  AL   N  SP G V +  +  +++     +  E  
Sbjct: 181  YKVMYVRIKPELMAGRGVATSDISDALNKENLESPGGQVRNDSTVMSVRTARGYQSAEDF 240

Query: 241  LDMVVARRG-GVAILLRDVATLSEGAADAENRAIYNGQTALAIDIVKVQDANTVQVVSDV 299
              +VV R   G  I L+DVA +  GA +  +    +G   +++ IV   DAN ++V   V
Sbjct: 241  EYLVVKRASDGTPIYLKDVADVFIGAENENSTFKSDGIVNVSMGIVPQSDANPLEVAKRV 300

Query: 300  RKRLDALNAELSPQNIQLRIVTDSSIPIQESVTQVQTTLIEGAALAVAIVFLFLNSWRST 359
             + +D +   L P+  +L I  DS++ I+ S+++V +TL     L + ++++F+   R+T
Sbjct: 301  HEEVDKVQQFL-PKGTRLAIDYDSTVFIERSISEVYSTLFITGGLVILVLYIFIGQLRAT 359

Query: 360  VITGLTLPIAIIGTLTVVDFLGFTLNTLSLLALTLSIGILVDDAIVVRENITRHLHMGKS 419
            +I  +T+P+++I       + GF++N ++L+AL LSIG++VDDAIVV ENI  H+  G+ 
Sbjct: 360  LIPAVTVPVSLISAFMAAYYFGFSINLITLMALILSIGLVVDDAIVVVENIFHHIERGEK 419

Query: 420  HLRAALDGTGEIGLAVIATTATIVAVFLPVAFMDGIVGRFFYQFGVTVSAAVLISLFVAF 479
             L AA  GT E+G AVIATT  +V VFLP++FMDG+VG  F +F V ++ AV+ S  +A 
Sbjct: 420  PLLAAYKGTREVGFAVIATTLVLVMVFLPISFMDGMVGLLFTEFSVLLAMAVIFSSLIAL 479

Query: 480  TLDPMLSSVWYDPDAQADAKRGPIGRLIARFDHGFEWMAGQYRHAIDWTLRHRLVTLLVT 539
            TL P+L S     + +       I RL AR + G       YR  +   +R R    +V 
Sbjct: 480  TLTPVLGSKLLKANVKPGRFNQLIDRLFARLESG-------YRQVVSRAIRWRWAAPVVI 532

Query: 540  AGIFIGSLFMVPLVGTEFVPDADEGRFQINLTAPVGSSLDYTTAKLQQVKKALREFPEVE 599
            A    GS  ++ LV  +  P  D G     +     +S +   A +  V++ L       
Sbjct: 533  AACIGGSYGLMQLVPAQLTPSEDRGVIFSFVRGADATSYNRMAANMDLVEQRLMPLLGQG 592

Query: 600  MLYS-TINT---GGAAGKHRAAILVGLVPLSAREQTPLSLAEPVRKRLSAIPGIEINILQ 655
             L S +I +   GG AG     +++ L   + R  T       VRK L+ IP + +    
Sbjct: 593  FLKSFSIQSPAFGGNAGDQTGFVIMILEDWNDRTVTAQEALSQVRKALAGIPDVRVFPFM 652

Query: 656  NGL-GGGESPVQLSILGDDRAVLEKIANGLVEDMKKIPGLVEVTSSTKDVTSILSVRLKP 714
             G  GG   PVQ  + G D + L+  A  L E+ +K P +        + T  L V +  
Sbjct: 653  PGFRGGSNEPVQFVLGGSDYSELKTWAEKLEEEAEKSPFMTGADIDYSEKTPELVVTIDK 712

Query: 715  AAASDLGIARADLAAALSALIGGEDVSKWTDAHGNSYDIVVRLPVERRSDAARLGELMIT 774
              A++LGI+   ++  L  ++GG+ V+ + +  G  YD+ +R      ++AA L ++ + 
Sbjct: 713  QRAAELGISVKSISDTLEVMLGGKKVTTFVE-RGEEYDVYLRGDENSFNNAADLSQIYMR 771

Query: 775  TGRTGANGAPLMVRLDQVADIGTVAAPAEIRRFDNRREILVSANI-TGRTLGDVTETLQG 833
            T  TG      +V LD V  I  VA+   +  ++ ++ + ++AN+  G TLG   + L  
Sbjct: 772  TA-TGE-----LVTLDTVTRIDEVASAIRLAHYNKQKSVTITANLEAGYTLGQALDFLD- 824

Query: 834  LTASRDLPAGYRIRFGGEAETMQETVGHMGTALSMAIIFIYIVLASQFGSFLQPLAIMVS 893
              A   LP    + + GE++  +E    +    ++A++  Y+VLA+QF SF+ PL +M++
Sbjct: 825  QKAQEILPNDISVSYSGESKDFKENQSSVAIVFALALLVAYLVLAAQFESFINPLVVMLT 884

Query: 894  LPLSLIGVLLGLMVAGSTINMFSLIGFIMLMGLVTKNGILLVDFANRERRRGLTLNEALA 953
            +P+ + G  LGL V G  +N++S IG IML+G+VTKNGIL+V+FAN+ R RG+   +A+ 
Sbjct: 885  VPMGVFGGFLGLFVMGQGMNIYSQIGMIMLIGMVTKNGILIVEFANQLRDRGVEFEKAII 944

Query: 954  NAGVIRFRPIIMTTLAMIFGMIPLGLAVGGGGAQRAPMAHAVVGGLISSTLLTLIVVPVI 1013
            +A   R RPI+MT    + G IPL ++ G G   R  +   +  G+  +TL+TL+V+P +
Sbjct: 945  DASARRLRPILMTAFTTLAGSIPLIVSTGAGYESRIAVGTVIFFGMGFATLVTLLVIPAM 1004

Query: 1014 LSYIDSITR 1022
               I   T+
Sbjct: 1005 YRLISGSTQ 1013