Pairwise Alignments

Query, 1048 a.a., AcrB/AcrD/AcrF family protein from Agrobacterium fabrum C58

Subject, 1036 a.a., multidrug resistance protein from Vibrio cholerae E7946 ATCC 55056

 Score =  474 bits (1219), Expect = e-137
 Identities = 307/1024 (29%), Positives = 515/1024 (50%), Gaps = 27/1024 (2%)

Query: 1    MFLTRISVNHPVFATMMMVALLVMGAFSLQRLGLDQYPNVDVPVVVVVTSYPGATPETVE 60
            M  T + +  PV A  +   ++++G  ++ ++ + +YP +   V+ V T Y GA+ + ++
Sbjct: 1    MRFTDVFIKRPVLAVSISFLIVLLGLQAIFKMQVREYPEMTNTVITVSTGYYGASADLIQ 60

Query: 61   MEVTRPVEDALNAIGGLDEVTSTSYEGRSVVVAKFKLEVQSSAAAQEVRDKIAAIEANFP 120
              +T+P+E A+     +D +TS S  GRS +    KL    +AA  +V  K  ++ +  P
Sbjct: 61   GFITQPLEQAVAQADNIDFMTSQSVLGRSTITVTMKLNTDPNAALSDVLAKTNSVRSQLP 120

Query: 121  EDTKKPVISRFDPAAEPILSLAISSTSLDVPALATLAEQKVVRQLTTVAGIGQATLVGGR 180
            ++ + P ++    +   +L +  +S  L    +    E+ V  QL  V G+    L GG 
Sbjct: 121  KEAEDPTVTMSTGSTTAVLYIGFTSNELASSQITDYLERVVNPQLYAVNGVSSIDLYGGM 180

Query: 181  KRQIDVTIDETRMRALGIGVNEVVTALRAGNSNSPAGSVVDPVSERTIQIQSRIEEPEAL 240
            K  + V +D  +M AL +   +V++ L A N  S  G  +           +++   E L
Sbjct: 181  KYALRVWLDPAKMAALNLSAADVMSILNANNYQSATGQAIGEFVLYNGSADTQVSTVEDL 240

Query: 241  LDMVVARRGGVAILLRDVATLSEGAADAENRAIYNGQTALAIDIVKVQDANTVQVVSDVR 300
              +VV    G    L D+A ++   +    RA  NG+ A+   I     AN + +  DV 
Sbjct: 241  ESLVVKAEKGTVTRLGDIAKVTLAKSHDTYRASANGREAVVAAINAAPSANPINIAKDVL 300

Query: 301  KRLDALNAELSPQNIQLRIVTDSSIPIQESVTQVQTTLIEGAALAVAIVFLFLNSWRSTV 360
            + L  L   + P NI++ ++ DS++ I ES+ +V  T++E A + + ++ LFL S R+ +
Sbjct: 301  EMLPELQKNM-PSNIEMNVLYDSTVAINESIHEVIKTIVEAALIVLVVITLFLGSLRAVL 359

Query: 361  ITGLTLPIAIIGTLTVVDFLGFTLNTLSLLALTLSIGILVDDAIVVRENITRHLHMGKSH 420
            I  +T+P+++IG   V+  +GF+ N ++LLA+ L+IG++VDDAIVV EN+ RH+  G+S 
Sbjct: 360  IPIVTIPLSLIGVAMVMQMMGFSWNLMTLLAMVLAIGLVVDDAIVVLENVDRHIKEGESP 419

Query: 421  LRAALDGTGEIGLAVIATTATIVAVFLPVAFMDGIVGRFFYQFGVTVSAAVLISLFVAFT 480
             RAA+ GT EI + VIA T T+ AV+ P+A M GI G  F +F +T++ +V +S  VA T
Sbjct: 420  FRAAIIGTREIAIPVIAMTLTLGAVYAPIALMGGITGSLFKEFALTLAGSVFVSGIVALT 479

Query: 481  LDPMLSSVWYDPDAQADAKRGPIGRLIARFDHGFEWMAGQYRHAIDWTLRHRLVTLLVTA 540
            L PM+ S          A   P  +   +  H  + M  +Y   +   + HR V +    
Sbjct: 480  LSPMMCS------KMLKANEAP-NKFELKVHHLLDRMTARYERMLTAVMAHRPVVIAFAF 532

Query: 541  GIFIGSLFMVPLVGTEFVPDADEGRFQINLTAPVGSSLDYTTAKLQQVKKALREFPEVEM 600
             +F     +   + +E  P  D+G   +  T P  ++LDY    +  V K L + PEV+ 
Sbjct: 533  IVFASLPMLFKFIPSELAPSEDKGVIMLMGTGPSNANLDYLANTMDDVNKILSDQPEVQ- 591

Query: 601  LYSTINTGGAAGKHRAAILVGLVPLSAREQTPLSLAEPVRKRLSAIPGIEINILQ----N 656
             ++ + T G    ++A  +  +VP S RE +  ++   V   +  IPG+ +   Q     
Sbjct: 592  -FAQVFT-GVPNSNQAFGIASMVPWSQREASQATVTNRVGTLVQDIPGMAVTAFQMPELP 649

Query: 657  GLGGGESPVQLSILGDDR-AVLEKIANGLVEDMKKIPGLVEVTSSTKDVTSILSVRLKPA 715
            G G G  P+Q  I        L  IA  ++ ++K  P  V         ++ + + +   
Sbjct: 650  GAGSG-LPIQFVITTPSNFESLFTIATDVLTEVKANPMFVYSDLDLNFDSATMKINIDKD 708

Query: 716  AASDLGIARADLAAALSALIGGEDVSKWTDAHGNSYDIVVRLPVERRSDAARLGELMITT 775
             A   G+   D+   LS ++    V++  D +G SY+++ ++  + R +   +    +  
Sbjct: 709  KAGAYGVTMQDIGITLSTMMADGYVNR-IDLNGRSYEVIPQVERKWRLNPESMNSYYV-- 765

Query: 776  GRTGANGAPLMVRLDQVADIGTVAAPAEIRRFDNRREILVSA-NITGRTLGDVTETLQGL 834
                A+G   ++ L  +  I  VA P  +  F+      V A    G  +GD     + L
Sbjct: 766  --RAADGK--VIPLGSLVTIDVVAEPRSLPHFNQLNSATVGAVPAPGTAMGDAINWFENL 821

Query: 835  TASRDLPAGYRIRFGGEAETMQETVGHMGTALSMAIIFIYIVLASQFGSFLQPLAIMVSL 894
             +S+ LP GY   + GEA         +     +A+  I++VLA QF S   PL IMVS+
Sbjct: 822  ASSK-LPKGYSHDYMGEARQYVTEGSALYATFGLALAIIFLVLAIQFESLRDPLVIMVSV 880

Query: 895  PLSLIGVLLGLMVAGSTINMFSLIGFIMLMGLVTKNGILLVDFANRER-RRGLTLNEALA 953
            PL++ G L+ L    +T+N++S +G I L+GL+TK+GIL+ + A  E+    L+  EA+ 
Sbjct: 881  PLAICGALIALAWGTATMNIYSQVGLITLVGLITKHGILICEVAKEEQLHNKLSRIEAVM 940

Query: 954  NAGVIRFRPIIMTTLAMIFGMIPLGLAVGGGGAQRAPMAHAVVGGLISSTLLTLIVVPVI 1013
            +A  +R RPI+MTT AMI G+IPL  A G G AQR  +   +V GL   TL TL V+PVI
Sbjct: 941  HAAKVRLRPILMTTAAMIAGLIPLMYATGAGAAQRFSIGIVIVSGLAIGTLFTLFVLPVI 1000

Query: 1014 LSYI 1017
             SY+
Sbjct: 1001 YSYL 1004