Pairwise Alignments

Query, 771 a.a., ATP-dependent DNA ligase from Agrobacterium fabrum C58

Subject, 636 a.a., ATP-dependent DNA ligase from Sinorhizobium meliloti 1021

 Score =  347 bits (889), Expect = 1e-99
 Identities = 205/579 (35%), Positives = 314/579 (54%), Gaps = 30/579 (5%)

Query: 193 WNSKPVSKKAGASTSGQKQAHALPKGARKQALPSFVPPALATLKPKPPEGSRWLHEIKFD 252
           W + PV + A               GA + A P+F+ P   TLK +PP+G+ W+HEIK D
Sbjct: 37  WTASPVDRLANL-------------GATQSAFPAFIEPCHPTLKKRPPDGADWVHEIKLD 83

Query: 253 GYRLQARVDQGKLQLLTRSGLDWTEKFGAAVAAALTALPAETVLIDGEIVVERDSGASDF 312
           GYR Q  ++ GK+ L TR+GLDWT +F  A+A A   L    V++DGE+ V   +G  DF
Sbjct: 84  GYRAQLHINGGKITLYTRTGLDWTTEF-EAIATAAEDLAGHDVVMDGEVTVFGKTGLPDF 142

Query: 313 SALQQDLSEGRDDRFVFYAFDLLYLDGSDLRGAALSERKALLEKLLPAGDPHLRYSQHFE 372
            AL+++L++       F AFDLL+LDG DLR   L ERK +L +L+      + Y  + E
Sbjct: 143 QALRRELAKRSSPNLTFQAFDLLHLDGYDLRRVPLIERKRVLRELIGDAAGTIAYVDYLE 202

Query: 373 -ESGALVLDHACRLSLEGVISKVKSSKYVSGRKGEWVKSKCSMRQEFVIGGYTVSSTSE- 430
            E G  V  HAC++ LEG++SK K + Y SGR+  W K+KC+ R  F I  +     ++ 
Sbjct: 203 LEEGEPVYRHACKMGLEGIVSKRKDAPYRSGRQEIWTKTKCTKRDAFPIVAFVEKLGAQP 262

Query: 431 HAIGSLALGVYENGKLRHVGRVGTGYSGDVAEMIFSRLKPLERKDSPFGDKLTALARRDL 490
             I SL LG +E  +L + G+  TGY+   A  +  RL PL    SP    +    +   
Sbjct: 263 RRIASLYLGRWEGDRLVYAGKAQTGYTLTAAREVRERLNPLIIGKSPLSHPIN---KPKA 319

Query: 491 HFVKPELVAEVEFRAWSGDGNLRHASFRGLREDKPAGEIEREEKAVSDSNAPQSQSKIKF 550
            +V+P++ AE+++   + DG LR   F+GL++   A    +   A +    P +   I  
Sbjct: 320 TWVEPQVYAEIDYGGVTDDGLLREPVFKGLQDVSRAAGKPKPTTAPASIRVPPAN--ILQ 377

Query: 551 THPDRLYWPNDGVTKEGLADYYAQVWRHMAPFVVNRPLALLRCPEGIEGQRFFQKHAWRG 610
             P+ +       +KE LA+Y+ +V      F+  RPL L+R    I G  F+ K     
Sbjct: 378 LLPEAVV-----PSKEELANYWTRVADRALHFLGGRPLKLVR---HIHGTTFYHKGPLPP 429

Query: 611 INKAIEQIKDPKDKGGEPL-IRITDFDGLMALVQSAALEIHPWGATTANWEKPDMITMDI 669
           I   + Q++  K +GG  + + + D  GL+ LV+  A+E+HPW A+  + E  D +  D+
Sbjct: 430 IPPEVHQLRIEKREGGAGVRLWVDDLAGLLGLVEIGAVELHPWAASVDDIEHADALIFDL 489

Query: 670 DPGEDVAWDAVIEAAQELKRRFEEAGLAAFVKTSGGKGLHVVSPLKPQAGWAPVKAFAKA 729
           DPGE V+W  V+E A  L+   E  G   + K +GGKG+H++SPL  +       A+AK 
Sbjct: 490 DPGEGVSWAFVVETALRLREFLEAEGFKTWPKLTGGKGVHLMSPLPAKMTHNAAHAYAKR 549

Query: 730 MATDMSKAEPEKYLSVATKAKRQGRIFIDYLRNGRGNTA 768
           +A   +  +P++Y++ A  ++R G++F+DYLRNGRG TA
Sbjct: 550 LAQQFASTDPDRYVTSAQLSRRPGKLFLDYLRNGRGTTA 588