Pairwise Alignments

Query, 277 a.a., hypothetical protein from Agrobacterium fabrum C58

Subject, 294 a.a., ATP-dependent DNA ligase from Sinorhizobium meliloti 1021

 Score =  166 bits (421), Expect = 4e-46
 Identities = 98/282 (34%), Positives = 162/282 (57%), Gaps = 8/282 (2%)

Query: 1   MNRRASWKGHLSFADFNCEIGLYSALTSAEKISFNIVNRKTGHRVERQYVDSDTGEPVFR 60
           M  RASWKG++  +  +C + LY A +++E+ISFN +++ T +R+  + VD + G  V R
Sbjct: 1   MAPRASWKGYIRLSLVSCPVRLYPATSASERISFNQLHKDTHNRINMKPVDPELGL-VER 59

Query: 61  DDQVKGYELDNGDHIVIEGDEIAKLMPDSDKVIHVKHFLPCDEIDKLYFDKSYYLAPTGE 120
            D VKGYE ++  +I+IE  ++  +  +S+  ++++ F+    +D +Y D  YYLAP G 
Sbjct: 60  SDLVKGYEYEDKKYIIIEDSDLESVRIESNHTMNIEAFVDAGSVDVIYQDAPYYLAPDGA 119

Query: 121 DGEEALTLLAKAMDDENVVALGEAVLFRRNRILLIRPSGKALVATTLNFSYEVRSETSVF 180
             EE   +L +A+     +A+   VL  R R++ I P    +   TL    EVR     F
Sbjct: 120 MAEETFVVLREALRRSGKLAIARLVLSSRERVVTIGPRETGMFVCTLRNPNEVRGTADYF 179

Query: 181 KSIPDIEFDDEMLELAGHIIEKRAGTFDPADYSDRYNDALAELVKAKIEGRE--IAKPPP 238
            +IP  + D EML+LA  +IE++  TFDP  Y DRY  AL ++++ K++G +  IA+ P 
Sbjct: 180 GNIPVGKPDPEMLQLAEALIEQKTTTFDPKQYEDRYEVALMQMIREKLKGHKPIIAQAPE 239

Query: 239 RKEDNIIDLKEALRRS---AGAGAGSGKKATSSGRKASRKAS 277
           R   N+++L +AL+ S   A   A S  KA  + ++ + KA+
Sbjct: 240 R--GNVVNLMDALKASLSQAKPPARSKPKAEPAAKEPAAKAA 279