Pairwise Alignments

Query, 779 a.a., diguanylate cyclase from Agrobacterium fabrum C58

Subject, 778 a.a., PAS domain S-box/diguanylate cyclase (GGDEF) domain from Pseudomonas stutzeri RCH2

 Score =  330 bits (846), Expect = 2e-94
 Identities = 211/578 (36%), Positives = 306/578 (52%), Gaps = 34/578 (5%)

Query: 208 DNVGRLIMIGAISGVTFLILFATAVAALVDRYLVDLKGLVDATLDGL-AVVRDGRIVELN 266
           D  G +++ G I  +T       A+     RY    + + +   +G+    RDGR +  N
Sbjct: 193 DEQGEIVVEGFIEDITAQRAILDALEQAELRY----RSIFENASEGIFQSTRDGRYLAAN 248

Query: 267 TRFAGLLGREEASLVGRNPDDLFKA--VDGQPTYLSRPAPVEAIRERGGQAQVFELGVRT 324
              A + G + A+ +  +  D+ +   V+G      R      + E  G+   FE  V  
Sbjct: 249 PALARIYGYDSATELVADLADIERRLYVEG-----GRREAFCRLMEHQGEVLNFESEVYR 303

Query: 325 IE------------YRGRPCEVMA----IRDLTEKREAQREIEYLARHDVLTGLSNRTMF 368
            +             RG   E +     ++D++E++  Q+++E  A HD+LTGL NR + 
Sbjct: 304 RDGTRIWISENAHVVRGANGEFICYEGTVQDISERKHYQQQLERQANHDLLTGLPNRILL 363

Query: 369 QTRLHQQIDNGDEEDEF-ALLALDLDRFKAVNDIFGHAEGDRVLKKVAAILDECARAGDV 427
             R+ Q +        +  L+ +DLD FK +ND  GH  GD +LK +AA L    R  D 
Sbjct: 364 NDRIEQGLARAARLGYYLTLVFIDLDNFKFINDGLGHVAGDELLKSIAARLAGSLRGSDT 423

Query: 428 VARLGGDEFVILTARHTKADEARLLAETILGMFALKMNVVNDPTAVGVSIGIAVFPRDGQ 487
           VAR+GGDEFV++ + H +      L E +L      + +      VG SIG+A+FP DG+
Sbjct: 424 VARVGGDEFVLVLSDHYRISTVISLLERVLNEIRRPVTLAGREFQVGASIGVAMFPGDGE 483

Query: 488 DHESIMHAADLALYRAKMGGRGILAFYDPLMDQEARERRQLETDLRLAINRDELVLNYQP 547
           D ++++  AD+A+Y AK  GR    F+   +++ A ER  LE  +R A+ RDE  ++YQP
Sbjct: 484 DAQTLLKHADIAMYAAKKRGRNNFQFFTHDLNRIADERLNLEAAMRAALERDEFSVHYQP 543

Query: 548 VLSVECGQVVGYEALVRWQHPTRGVVPPDVFIPIAEESGIIISLGEWVLREACRQASTW- 606
            +     ++VG EAL RW     GV+ PD FIP+AEESG+I+ L   VLR A   A  W 
Sbjct: 544 KVDAS-RRIVGVEALARWTDAQLGVIGPDRFIPVAEESGLIMPLTLAVLRRAFSDARQWN 602

Query: 607 ---APHLKIAVNVSPLQFSLANLGHVVCTVLMQTGLSPNRLELEITEAALLKDRKATLVI 663
              A  L +AVN+SPL F   ++   VCTVL   GL PN++ELEITE   L D    + I
Sbjct: 603 AGRAIPLMVAVNLSPLLFLGDDVVDRVCTVLDDVGLPPNQVELEITETVFLGDGTRAVAI 662

Query: 664 LNQLKALGVAIVMDDFGTGYSSLSNLQSFPFDKIKIDRSFIAAMSEDDNARAIVRAVIGL 723
           L + KA G  + MDDFGTGYS+LS L+ FP D IKIDRS +  + +++    I RA I L
Sbjct: 663 LAEFKARGFRLAMDDFGTGYSALSYLRRFPLDIIKIDRSLVTGLEQEEEVAMIARAAISL 722

Query: 724 GRSLDLPVTAEGIETDAQYRMVVDEGCAQAQGYLFGRP 761
           G+SL   V AEG+E  AQ+  +   GC + QGYL  RP
Sbjct: 723 GKSLHKTVVAEGVENAAQFDFLCRNGCDEFQGYLLSRP 760